RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TSPAN31Q12999 210 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 ZCWPW2Q504Y3 356 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR10K2Q6IF99 312 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 SPOPLQ6IQ16 392 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 SCXQ7RTU7 201 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 YIPF7Q8N8F6 280 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 BPIFB6Q8NFQ5 453 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 LMX1AQ8TE12 382 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 C16orf78Q8WTQ4 265 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 ASB17Q8WXJ9 295 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 ACY3Q96HD9 319 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 PKMYT1Q99640 499 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 MED28Q9H204 178 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR51I1Q9H343 314 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 C11orf49Q9H6J7 331 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 SLC2A9Q9NRM0 540 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 DNAJC12Q9UKB3 198 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 SLC22A13Q9Y226 551 aa1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 LSM5Q9Y4Y9 91 aaKnown RBP1.87□□□□□ -2.11
HMGB1P17-201ENST00000403495 CRB1P82279 1406 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 TRAV8-1A0A0A6YYK1 113 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 EVPLLA8MZ36 301 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 H3BSA7 217 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 LECT2O14960 151 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 SYNGR2O43760 224 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 TCRBP04435 133 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 DDTP30046 118 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 HSPA9P38646 679 aaKnown RBP1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 SULT1A1P50225 295 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 NAA20P61599 178 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 LSM6P62312 80 aaKnown RBP1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 HLA-DRB3P79483 266 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 MRPS25P82663 173 aaKnown RBP1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 FABP5Q01469 135 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 LRRC75BQ2VPJ9 315 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 NOXRED1Q6NXP6 359 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 Q6ZQT7 251 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 Q8NAQ8 132 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 LY6G5BQ8NDX9 201 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR2V1Q8NHB1 315 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 Q8WTZ3 238 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 TMA16Q96EY4 203 aaKnown RBP1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 PYURFQ96I23 114 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 ABHD14BQ96IU4 210 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 GNB1LQ9BYB4 327 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 ZNF286AQ9HBT8 521 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 RPUSD1Q9UJJ7 312 aaKnown RBP1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 LINC00588Q9Y4M8 146 aa1.86□□□□□ -2.11
HMGB1P17-201ENST00000403495 IGLV10-54A0A075B6I4 117 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 TRBV24-1A0A075B6N3 115 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 TGIF2-C20orf24A0A0A6YYL0 155 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 MRASO14807 208 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 SH2D1AO60880 128 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 STK16O75716 305 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 KRT75O95678 551 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 UCHL3P15374 230 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR1E2P47887 323 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 REG1BP48304 166 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 IDH3GP51553 393 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 SNAP25P60880 206 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 RPS24P62847 133 aaKnown RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 HERVK_113P63121 156 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 CCL7P80098 99 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 BSPH1Q075Z2 132 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 SRSF6Q13247 344 aaKnown RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR2F1Q13607 317 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 JOSD1Q15040 202 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 PDGFRLQ15198 375 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 HIST3H3Q16695 136 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 AKIRIN2Q53H80 203 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 ACSBG2Q5FVE4 666 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 C10orf91Q5T1B1 145 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 HIST2H3PS2Q5TEC6 136 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 LYZL2Q7Z4W2 148 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 KRT222Q8N1A0 295 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 UBL4BQ8N7F7 174 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR51D1Q8NGF3 324 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 HIST1H2BAQ96A08 127 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 IMP4Q96G21 291 aaKnown RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 ANKRD36BP1Q96IX9 119 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 SLC35G5Q96KT7 338 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR52B2Q96RD2 323 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 HES4Q9HCC6 221 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 PCYT1BQ9Y5K3 369 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 ZBED9Q6R2W3 1325 aa1.85□□□□□ -2.11
HMGB1P17-201ENST00000403495 IGHV3OR15-7A0A075B7D8 119 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 A0A1B0GU33 70 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 E7EQL1 145 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 ALOX5APP20292 161 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 CDK2P24941 298 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 HSD11B1P28845 292 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 PPP1CCP36873 323 aaKnown RBP1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 CTBP2P56545 445 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 KRTAP10-1P60331 282 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 SPCS3P61009 180 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 RAB5BP61020 215 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 RANP62826 216 aaKnown RBP1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 EMX1Q04741 257 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 TMED2Q15363 201 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms