RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	HSPB9	Q9BQS6	159 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF251	Q9BRH9	671 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FAM192A	Q9GZU8	254 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CST11	Q9H112	138 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	EDA2R	Q9HAV5	297 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	GNG12	Q9UBI6	72 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	A3GALT2	U3KPV4	340 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461		A0A0B4J203	849 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TRAV24	A0A0B4J272	114 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	DAPL1	A0PJW8	107 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461		A8MZ25	164 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SPINT2	O43291	252 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	HSPA12A	O43301	675 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ATP8B1	O43520	1251 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SULT1B1	O43704	296 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ORC5	O43913	435 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FKBP6	O75344	327 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR7C1	O76099	320 aa	Predicted RBP	5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LGALS1	P09382	135 aa	Known RBP	5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SLC2A2	P11168	524 aa	Predicted RBP	5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	EDN2	P20800	178 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RAB9A	P51151	201 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FLOT2	Q14254	428 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	KISS1	Q15726	138 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZSCAN26	Q16670	478 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	C6orf183	Q5T699	404 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF691	Q5VV52	312 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	C12orf73	Q69YU5	71 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ELP2	Q6IA86	826 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PYHIN1	Q6K0P9	492 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FAHD1	Q6P587	224 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SLC25A48	Q6ZT89	311 aa	Known RBP	5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	GTSCR1	Q86UQ5	136 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SATL1	Q86VE3	508 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SERPINA12	Q8IW75	414 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TMEM104	Q8NE00	496 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	DLX4	Q92988	240 aa	Predicted RBP	5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	S100A13	Q99584	98 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TUBA4B	Q9H853	241 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RNF150	Q9ULK6	438 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	STUB1	Q9UNE7	303 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	WSB1	Q9Y6I7	421 aa		5.18	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TRAV39	A0A0B4J263	110 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SNTN	A6NMZ2	147 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461		G3V318	75 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461		H0Y980	276 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	AIP	O00170	330 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ATP6V0E1	O15342	81 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	HLA-DRB1	P01911	266 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RAB3A	P20336	220 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	DAP	P51397	102 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	F2RL1	P55085	397 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PPP3R1	P63098	170 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TMEM267	Q0VDI3	215 aa	Predicted RBP	5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ECSCR	Q19T08	205 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LPCAT4	Q643R3	524 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LINC00596	Q86U02	117 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PARP16	Q8N5Y8	322 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TCTEX1D1	Q8N7M0	179 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SUMF2	Q8NBJ7	301 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR8J1	Q8NGP2	316 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PLPPR1	Q8TBJ4	325 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TSEN15	Q8WW01	171 aa	Known RBP	5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	THTPA	Q9BU02	230 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	METTL9	Q9H1A3	318 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RIBC2	Q9H4K1	309 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SPACA1	Q9HBV2	294 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PLSCR3	Q9NRY6	295 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IMPAD1	Q9NX62	359 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FOXA2	Q9Y261	457 aa	Predicted RBP	5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ST3GAL6	Q9Y274	331 aa		5.17	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IGHV3-43	A0A0B4J1X8	118 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IGHV4-28	A0A0C4DH34	117 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461		A0A1W2PN81	502 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TMEM212	A6NML5	194 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF736	B4DX44	427 aa	Predicted RBP	5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461		G3V2T6	193 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NBR2	O15453	112 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LANCL1	O43813	399 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NOL3	O60936	208 aa	Known RBP	5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MITF	O75030	526 aa	Predicted RBP	5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF780A	O75290	641 aa	Predicted RBP	5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RGS11	O94810	467 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	HSPB1	P04792	205 aa	Known RBP	5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ALPL	P05186	524 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IGHV3-43D	P0DP04	118 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZP3	P21754	424 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CHRNA7	P36544	502 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	AMT	P48728	403 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF137P	P52743	207 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ACTB	P60709	375 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	GNGT1	P63211	74 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF85	Q03923	595 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CBX3	Q13185	183 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PLGLA	Q15195	96 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PIGY	Q3MUY2	71 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ATAD3C	Q5T2N8	411 aa		5.16	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TRAT1	Q6PIZ9	186 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms