RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 C6orf15Q6UXA7 325 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 LRRC61Q9BV99 259 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 HCFC2Q9Y5Z7 792 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 C1SP09871 688 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 GLIPR1P48060 266 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 CEACAM16Q2WEN9 425 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 GAGE2AQ6NT46 116 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 MORN4Q8NDC4 146 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 PCGF1Q9BSM1 259 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 GGACTQ9BVM4 153 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 INS-IGF2F8WCM5 200 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 INSP01308 110 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 SMAD4Q13485 552 aaKnown RBP7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 CYB561D1Q8N8Q1 229 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 SMPXQ9UHP9 88 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 ERVK11-1P61568 191 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 HSD52Q0P140 79 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 SLC48A1Q6P1K1 146 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 BIVMQ86UB2 503 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 MS4A4AQ96JQ5 239 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 H3BUT2 72 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 HBDP02042 147 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 GZMHP20718 246 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 NPC2P61916 151 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 ORMDL2Q53FV1 153 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 RIMKLAQ8IXN7 391 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 TTC9BQ8N6N2 239 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 BAHD1Q8TBE0 780 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 ZNF479Q96JC4 524 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 GLIPR2Q9H4G4 154 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 SMN1Q16637 294 aaKnown RBP7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 ST3GAL2Q16842 350 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 MPV17L2Q567V2 206 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 PCSK4Q6UW60 755 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 ADGRA1Q86SQ6 560 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 LOC102723996A0A087X1L8 192 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 NPIPB4C9JG80 1138 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 NHP2Q9NX24 153 aaKnown RBP7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 PRRT4C9JH25 899 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 MLNRO43193 412 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 GFRALQ6UXV0 394 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 ISL2Q96A47 359 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 HSF5Q4G112 596 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 UTF1Q5T230 341 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 DSCR8Q96T75 97 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 VWDEQ8N2E2 1590 aa7.53□□□□□ -1.2
CACNA1C-220ENST00000399655 NRXN1Q9ULB1 1477 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 TRGV8A0A0C4DH27 118 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 H0YIG0 161 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 ACRP10323 421 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 B4GALT1P15291 398 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 OTX1P32242 354 aaPredicted RBP7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 UCP2P55851 309 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 DCAF12L1Q5VU92 463 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 C15orf39Q6ZRI6 1047 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 ATOH8Q96SQ7 321 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 ST20Q9HBF5 79 aa7.52□□□□□ -1.2
CACNA1C-220ENST00000399655 GPR25O00155 361 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 Q9Y3F1 56 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 EML5Q05BV3 1969 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A0G2JMM0 328 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A1W2PPB8 328 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 KIR3DP1A8MWS1 328 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MP68P56378 58 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 CLDND2Q8NHS1 167 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 AGLP35573 1532 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MYO18BQ8IUG5 2567 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 IGHV3OR16-12A0A075B7B8 117 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 KISS1Q15726 138 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 SPRED2Q7Z698 418 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 GFRA3O60609 400 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 ZP1P60852 638 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM163AQ96GL9 167 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MPC1Q9Y5U8 109 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 FBXO17Q96EF6 278 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 COL5A2P05997 1499 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 ARHGAP23Q9P227 1491 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A0A6YYD4 124 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 LOC390937A0A1W2PQ73 354 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 PQLC2LA1A4F0 135 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 CDC42EP2O14613 210 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 GPR6P46095 362 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 NOXO1Q8NFA2 376 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MZB1Q8WU39 189 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MRPL24Q96A35 216 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 Q96M85 177 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 IFI27L2Q9H2X8 130 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 LAMA4Q16363 1823 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 IQCF6A8MYZ5 107 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 HOGA1Q86XE5 327 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 FMN2Q9NZ56 1722 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 RUNX3Q13761 415 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MIC13Q5XKP0 118 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 MS4A3Q96HJ5 214 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 LOXL4Q96JB6 756 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 SLC25A19Q9HC21 320 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 NDUFA3O95167 84 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms