RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 Q71RC1 249 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 NEU3Q9UQ49 428 aa9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 PIGYQ3MUY2 71 aa9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 WDR34Q96EX3 536 aa9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 ABHD14BQ96IU4 210 aa9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 SLC6A13Q9NSD5 602 aa9.6□□□□□ -0.87
CACNA1C-215ENST00000399637 CD99P14209 185 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 CDC42EP3Q9UKI2 254 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 PAM16Q9Y3D7 125 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 A0A1B0GTL3 188 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 STAG3L3P0CL85 134 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 CYB5R2Q6BCY4 276 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 IGLV3-16A0A075B6K0 115 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 GDF9O60383 454 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 ADAP1O75689 374 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 LINC00470Q9BZP3 86 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 TMEM30AQ9NV96 361 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 TRBV5-3A0A0A0MS03 114 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 C3orf36Q3SXR2 165 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 LTBP4Q8N2S1 1624 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 CLDN14O95500 239 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 CDKN1AP38936 164 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 NPFFO15130 113 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 PITX3O75364 302 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 IGHV4-39P01824 125 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 OR1K1Q8NGR3 316 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 ITLN1Q8WWA0 313 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 FRRS1LQ9P0K9 344 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 ELF5Q9UKW6 265 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 V9GYH0 126 aa9.59□□□□□ -0.87
CACNA1C-215ENST00000399637 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 MMP9P14780 707 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 PRDX2P32119 198 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 HINT1P49773 126 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 ATG4DQ86TL0 474 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 IGHV1-69-2A0A0G2JMI3 117 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 NKX2-6A6NCS4 301 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 PROB1E7EW31 1015 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 HPRT1P00492 218 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 HBZP02008 142 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 PNLIPP16233 465 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 PSG6Q00889 435 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 NCMAPQ5T1S8 102 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 C17orf47Q8NEP4 570 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 MRPL30Q8TCC3 161 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 CBLN3Q6UW01 205 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 CEACAM18A8MTB9 384 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 PSG9Q00887 426 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF880Q6PDB4 577 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 MSRB3Q8IXL7 192 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 COX14Q96I36 57 aa9.58□□□□□ -0.88
CACNA1C-215ENST00000399637 CTXND1A0A1B0GTU2 59 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNHIT1O43257 154 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 WISP3O95389 354 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 EGR1P18146 543 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 CIRBPQ14011 172 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 FAM214BQ7L5A3 538 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 ADAD2Q8NCV1 583 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 OR10AC1Q8NH08 325 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 MRPL24Q96A35 216 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 LNP1A1A4G5 178 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 OGG1O15527 345 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 CA11O75493 328 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 GZMBP10144 247 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 GCSAMQ8N6F7 178 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 FAM74A7A6NL05 159 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 C5orf67F2Z3F1 127 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 KBTBD11O94819 623 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 SRSF7Q16629 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 FAM60AQ9NP50 221 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 FOXJ2Q9P0K8 574 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 A0A087X0M5 115 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 A0A1B0GX30 115 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 CELA2AP08217 269 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 ST6GALNAC3Q8NDV1 305 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 PTPRZ1P23471 2315 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 NPBWR2P48146 333 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 STHQ8IWL8 128 aa9.57□□□□□ -0.88
CACNA1C-215ENST00000399637 WNK3Q9BYP7 1800 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 IFNL4K9M1U5 179 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 TRGV3P03979 118 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 GNLYP22749 145 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 MVDP53602 400 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms