RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 LHX9Q9NQ69 397 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 ZDHHC8Q9ULC8 765 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 A0A1B0GV72 72 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 GCM2O75603 506 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-209ENST00000399352 LHX8Q68G74 356 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 ERASQ7Z444 233 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 SCNM1Q9BWG6 230 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 TSPAN2O60636 221 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 PRDX2P32119 198 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 FOXL2P58012 376 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 OR10AG1Q8NH19 301 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 SRSF12Q8WXF0 261 aaKnown RBP13.93□□□□□ -0.18
ITSN1-209ENST00000399352 SF3B6Q9Y3B4 125 aaKnown RBP13.93□□□□□ -0.18
ITSN1-209ENST00000399352 IGHV3-72A0A0B4J1Y9 119 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 DPRXA6NFQ7 191 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 H3BTX0 84 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 SNAI2O43623 268 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 MAP1LC3AQ9H492 121 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 DNAJC4Q9NNZ3 241 aa13.93□□□□□ -0.18
ITSN1-209ENST00000399352 COL16A1Q07092 1604 aaPredicted RBP13.92□□□□□ -0.18
ITSN1-209ENST00000399352 TMEM210A6NLX4 147 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 NXPH1P58417 271 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 TMEM78Q5T7P6 136 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 FSCN3Q9NQT6 498 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 PEF1Q9UBV8 284 aaKnown RBP13.92□□□□□ -0.18
ITSN1-209ENST00000399352 FGF12P61328 243 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
ITSN1-209ENST00000399352 CT55Q8WUE5 264 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 ST6GALNAC6Q969X2 333 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 KCNS1Q96KK3 526 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 RAXQ9Y2V3 346 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 RBFOX2O43251 390 aaKnown RBP eCLIP13.92□□□□□ -0.18
ITSN1-209ENST00000399352 CD3EP07766 207 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 ATRAIDQ6UW56 229 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 SFRP2Q96HF1 295 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 SCN1AP35498 2009 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 ZNF318Q5VUA4 2279 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 IGKV3D-15A0A087WSY6 115 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 IGHV1OR15-9A0A0B4J2B8 117 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 A0A0U1RQV5 110 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 ZG16O60844 167 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 EPHA8P29322 1005 aaPredicted RBP13.92□□□□□ -0.18
ITSN1-209ENST00000399352 ARF6P62330 175 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 HERPUD1Q15011 391 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 TDHQ8IZJ6 230 aa13.92□□□□□ -0.18
ITSN1-209ENST00000399352 TJP1Q07157 1748 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 WISP3O95389 354 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 PSG4Q00888 419 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 TMEM70Q9BUB7 260 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 KIF13AQ9H1H9 1805 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 PEBP1P30086 187 aaKnown RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 RPL27AP46776 148 aaKnown RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 RPS11P62280 158 aaKnown RBP eCLIP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 LAIR2Q6ISS4 152 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 C19orf54Q5BKX5 351 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 WNT5BQ9H1J7 359 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 APC2O95996 2303 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 K7N7A8 449 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 DXOO77932 396 aaKnown RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 TSPAN13O95857 204 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 CCL4P13236 92 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 FOXA3P55318 350 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 C1orf100Q5SVJ3 147 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 MBNL2Q5VZF2 373 aaKnown RBP13.91□□□□□ -0.18
ITSN1-209ENST00000399352 LINC00469Q8N7U9 141 aa13.91□□□□□ -0.18
ITSN1-209ENST00000399352 LIFP15018 202 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 CEACAM21Q3KPI0 293 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 HEXA-AS1Q9H8Q6 139 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 SLC25A10Q9UBX3 287 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-209ENST00000399352 LAMB1P07942 1786 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 TNFSF14O43557 240 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 SLC25A17O43808 307 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 OR2H2O95918 312 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 SMIM13P0DJ93 91 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 RND2P52198 227 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 SDHCQ99643 169 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-209ENST00000399352 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 TFPI2P48307 235 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 ZP1P60852 638 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 ZNF645Q8N7E2 425 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 SPSB4Q96A44 273 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 A1L4Q6 167 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 IL4P05112 153 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 FUT5Q11128 374 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 FAM27BQ5VT28 67 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 MTURNQ8N3F0 131 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 ZNF441Q8N8Z8 693 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 OR4D5Q8NGN0 318 aa13.9□□□□□ -0.18
ITSN1-209ENST00000399352 TRBV5-7A0A0A0MS05 114 aa13.89□□□□□ -0.19
ITSN1-209ENST00000399352 C2orf68Q2NKX9 166 aa13.89□□□□□ -0.19
ITSN1-209ENST00000399352 POC1AQ8NBT0 407 aa13.89□□□□□ -0.19
ITSN1-209ENST00000399352 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
ITSN1-209ENST00000399352 FOXS1O43638 330 aa13.89□□□□□ -0.19
ITSN1-209ENST00000399352 NPIPB7O75200 414 aa13.89□□□□□ -0.19
ITSN1-209ENST00000399352 ZNF708P17019 499 aa13.89□□□□□ -0.19
ITSN1-209ENST00000399352 SELENOTP62341 195 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms