RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 IMMP1LQ96LU5 166 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 MS4A10Q96PG2 267 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 OR51B6Q9H340 312 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
APOB-202ENST00000399256 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
APOB-202ENST00000399256 KIR2DL5BA0A0G2JN68 375 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 KIR2DL5BA0A0G2JPC4 375 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 DNPH1O43598 174 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 RAB4AP20338 218 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 ARF1P84077 181 aaKnown RBP11.81□□□□□ -0.52
APOB-202ENST00000399256 RIPPLY2Q5TAB7 128 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 KIR2DL5AQ8N109 375 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 SDSLQ96GA7 329 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 TBX15Q96SF7 602 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 PRRG4Q9BZD6 226 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 DEGS1O15121 323 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 UBE2G2P60604 165 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
APOB-202ENST00000399256 PPP1CBP62140 327 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 TCF23Q7RTU1 214 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 STRADBQ9C0K7 418 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 R4GN57 208 aa11.81□□□□□ -0.52
APOB-202ENST00000399256 LOC102723996A0A087X1L8 192 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 TMEM210A6NLX4 147 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 RHBDL1O75783 438 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 FAM58AQ8N1B3 248 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 NCKAP5O14513 1909 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 TRBV6-6A0A0A6YYG2 114 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 SIRPB1O00241 398 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 KRASP01116 189 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 C1QTNF9P0C862 333 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 SRD5A2P31213 254 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 FOXG1P55316 489 aaPredicted RBP11.8□□□□□ -0.52
APOB-202ENST00000399256 TMEM147Q9BVK8 224 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 GRIFINA4D1Z8 144 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 LRP5LA4QPB2 252 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 RAMP3O60896 148 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 OR10J1P30954 320 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 G6PCP35575 357 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 SPINK9Q5DT21 86 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 LINC01551Q86U37 167 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 TRAPPC2LQ9UL33 140 aa11.8□□□□□ -0.52
APOB-202ENST00000399256 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.79□□□□□ -0.52
APOB-202ENST00000399256 VENTXO95231 258 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 COX5AP20674 150 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 OR5A2Q8NGI9 324 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 OR1L1Q8NH94 360 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 KCNE4Q8WWG9 221 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 DCAF16Q9NXF7 216 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 ATP5G3P48201 142 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 LCN2P80188 198 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 ZNF816Q0VGE8 651 aaPredicted RBP11.79□□□□□ -0.52
APOB-202ENST00000399256 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 WDYHV1Q96HA8 205 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 PXMP4Q9Y6I8 212 aa11.79□□□□□ -0.52
APOB-202ENST00000399256 MLNRO43193 412 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 HPRT1P00492 218 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 MBP02144 154 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 P04436 131 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 ADMP35318 185 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 GNB1P62873 340 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 TDRG1Q3Y452 100 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 TMEM208Q9BTX3 173 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 NPCDR1Q9BY65 106 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 FSCN3Q9NQT6 498 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 FREM1Q5H8C1 2179 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 MRPL33O75394 65 aaKnown RBP11.78□□□□□ -0.52
APOB-202ENST00000399256 NDUFB4O95168 129 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 WNT2P09544 360 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 HNF1AP20823 631 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 ZNF709Q8N972 641 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 TNRC6BQ9UPQ9 1833 aaKnown RBP11.78□□□□□ -0.52
APOB-202ENST00000399256 DOCK11Q5JSL3 2073 aa11.78□□□□□ -0.52
APOB-202ENST00000399256 LAMTOR5O43504 91 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 ZG16O60844 167 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 OR3A1P47881 315 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 SRYQ05066 204 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 GCSAMLQ5JQS6 135 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 DCAF10Q5QP82 559 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 LINC00596Q86U02 117 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.52
APOB-202ENST00000399256 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.52
APOB-202ENST00000399256 WDR54Q9H977 334 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 NCOR1O75376 2440 aa11.77□□□□□ -0.52
APOB-202ENST00000399256 BDP1A6H8Y1 2624 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 LY6G6EA0A0G2JKS1 128 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
APOB-202ENST00000399256 NPSP0C0P6 89 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms