RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 SPTBN4Q9H254 2564 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 FAM24AA6NFZ4 105 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 H0Y980 276 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 JTBO76095 146 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 LINC00614P0C842 121 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 C1QTNF9P0C862 333 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 LPAR6P43657 344 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 GABRA2P47869 451 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 OR3A1P47881 315 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 FAM27E3Q08E93 113 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 SPRNQ5BIV9 151 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 ACP7Q6ZNF0 438 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 MMP26Q9NRE1 261 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 SPTA1P02549 2419 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 NUDT19A8MXV4 375 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 AGPAT2O15120 278 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 GPR137BO60478 399 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 SERPINE2P07093 398 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 MST1LQ2TV78 715 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 KRTCAP3Q53RY4 240 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 MOB1BQ7L9L4 216 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 Q8NA96 180 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 MRGPRDQ8TDS7 321 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 LRRC29Q8WV35 223 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 MALSU1Q96EH3 234 aa9.88□□□□□ -0.83
COL25A1-202ENST00000399127 MED19A0JLT2 244 aaPredicted RBP9.87□□□□□ -0.83
COL25A1-202ENST00000399127 C12orf77C9JDV5 145 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 IFNA17P01571 189 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 VDAC1P21796 283 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 S100GP29377 79 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 P2RY1P47900 373 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 UCNP55089 124 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 NDUFA6P56556 154 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 CD81P60033 236 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 COL10A1Q03692 680 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 PJVKQ0ZLH3 352 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 PRR30Q53SZ7 412 aaPredicted RBP9.87□□□□□ -0.83
COL25A1-202ENST00000399127 MBNL2Q5VZF2 373 aaKnown RBP9.87□□□□□ -0.83
COL25A1-202ENST00000399127 HSD17B11Q8NBQ5 300 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 OR5D13Q8NGL4 314 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 COQ2Q96H96 371 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 MBNL3Q9NUK0 354 aaKnown RBP9.87□□□□□ -0.83
COL25A1-202ENST00000399127 USF3Q68DE3 2245 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 TMEM30CPA0ZSE6 113 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 CRYAAP02489 173 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 GLIPR1P48060 266 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 EIF5AP63241 154 aaKnown RBP9.87□□□□□ -0.83
COL25A1-202ENST00000399127 EWSR1Q01844 656 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL25A1-202ENST00000399127 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 FAM24BQ8N5W8 94 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 BEND2Q8NDZ0 799 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 OR52L2PQ8NGH6 319 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 RFESDQ8TAC1 157 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 MUCL1Q96DR8 90 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 DCTN5Q9BTE1 182 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 SH3BGRL3Q9H299 93 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 WIPI2Q9Y4P8 454 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 PTPRQQ9UMZ3 2332 aa9.87□□□□□ -0.83
COL25A1-202ENST00000399127 IGSF23A1L1A6 192 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.86□□□□□ -0.83
COL25A1-202ENST00000399127 TMEM50AO95807 157 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 GAPDHP04406 335 aaKnown RBP9.86□□□□□ -0.83
COL25A1-202ENST00000399127 EGR1P18146 543 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 SSTR5P35346 364 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 FHITP49789 147 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 EDDM3AQ14507 147 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 HMGN3Q15651 99 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 TIMM23BQ5SRD1 257 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 EIF5AL1Q6IS14 154 aaKnown RBP9.86□□□□□ -0.83
COL25A1-202ENST00000399127 GFRALQ6UXV0 394 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IL34Q6ZMJ4 242 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 OR2C3Q8N628 320 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 SPIN2AQ99865 258 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 SPIN2BQ9BPZ2 258 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 KCNIP1Q9NZI2 227 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
COL25A1-202ENST00000399127 RFNGQ9Y644 331 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IGHV3OR15-7A0A075B7D8 119 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IGHV3-43A0A0B4J1X8 118 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 H3BP45 60 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 C1QL1O75973 258 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 CST7O76096 145 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IGKV1-39P01597 117 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IGKV1D-39P04432 117 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IGHV3-43DP0DP04 118 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 IL2RGP31785 369 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 GAGE1Q13065 139 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 SMIM21Q3B7S5 101 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 GPR157Q5UAW9 335 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 Q6ZRM9 215 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 ZNF808Q8N4W9 903 aaPredicted RBP9.86□□□□□ -0.83
COL25A1-202ENST00000399127 TMEM217Q8N7C4 229 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 FAM57AQ8TBR7 257 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 SNRNP40Q96DI7 357 aaKnown RBP9.86□□□□□ -0.83
COL25A1-202ENST00000399127 SNHG12Q9BXW3 62 aa9.86□□□□□ -0.83
COL25A1-202ENST00000399127 TUBA4BQ9H853 241 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms