RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 LSAMPQ13449 338 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 PYDC2Q56P42 97 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 CCDC144NLQ6NUI1 221 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 FAM71F2Q6NXP2 309 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 FAAP20Q6NZ36 180 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RBMS3Q6XE24 437 aaKnown RBP9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 LINC00299Q6ZSB3 139 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TGIF2LXQ8IUE1 241 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 Q8N402 240 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 FAM216AQ8WUB2 273 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 THAP7Q9BT49 309 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 FXYD6Q9H0Q3 95 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 SDHAF2Q9NX18 166 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 PIPOXQ9P0Z9 390 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF107Q9UII5 783 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GAB2Q9UQC2 676 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TCF19Q9Y242 345 aa9.95□□□□□ -0.82
HLA-DQB1-203ENST00000399082 IFNA2P01563 188 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RNASE1P07998 156 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GPR12P47775 334 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 LUMP51884 338 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TAS2R19P59542 299 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 KLF9Q13886 244 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 LY6EQ16553 131 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 BAK1Q16611 211 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ACTBL2Q562R1 376 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 AADACL3Q5VUY0 350 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 STEAP1BQ6NZ63 245 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GLDNQ6ZMI3 551 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF383Q8NA42 475 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 OR4C16Q8NGL9 310 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 OR5R1Q8NH85 324 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 MRGPRFQ96AM1 343 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 MOB3AQ96BX8 217 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF2Q9BSG1 426 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 DPAGT1Q9H3H5 408 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 VPREB3Q9UKI3 123 aa9.94□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ATRQ13535 2644 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 OR5H14A6NHG9 310 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 M0R1X1 148 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TXNL1O43396 289 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GPR137BO60478 399 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 CSF1P09603 554 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TBPP20226 339 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RIPPLY3P57055 190 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 FXYD4P59646 89 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 EBI3Q14213 229 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RNASE10Q5GAN6 216 aaKnown RBP9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 MOB3BQ86TA1 216 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 Q8N6K4 173 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF645Q8N7E2 425 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 DRAXINQ8NBI3 349 aaPredicted RBP9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 S1PR3Q99500 378 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GHITMQ9H3K2 345 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 CCL28Q9NRJ3 127 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF221Q9UK13 617 aa9.93□□□□□ -0.82
HLA-DQB1-203ENST00000399082 FAM181BA6NEQ2 426 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 LINC00473A8K010 186 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 H0YJW9 148 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RAB3DO95716 219 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 IGKV1D-33P01593 117 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 IGKV1-33P01594 117 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 CD1BP29016 333 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 BRS3P32247 399 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RPL30P62888 115 aaKnown RBP9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RELBQ01201 579 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF45Q02386 682 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 C16orf87Q6PH81 154 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TMEM17Q86X19 198 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 THNSL2Q86YJ6 484 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GDPD1Q8N9F7 314 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 OR5AN1Q8NGI8 311 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 SECTM1Q8WVN6 248 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 CAPSLQ8WWF8 208 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 DDB2Q92466 427 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GPHA2Q96T91 129 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ABCB10Q9NRK6 738 aa9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RBM7Q9Y580 266 aaKnown RBP9.92□□□□□ -0.82
HLA-DQB1-203ENST00000399082 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 GNRHRP30968 328 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 DUTP33316 252 aaKnown RBP9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 MSMO1Q15800 293 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ZNF818PQ6ZRF7 136 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 ARRDC1Q8N5I2 433 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 OR6F1Q8NGZ6 308 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 EAF1Q96JC9 268 aaPredicted RBP9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 RITA1Q96K30 269 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 SLC5A7Q9GZV3 580 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 TAS2R8Q9NYW2 309 aa9.91□□□□□ -0.82
HLA-DQB1-203ENST00000399082 BTBD17A6NE02 478 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms