RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 AKIRIN1Q9H9L7 192 aaPredicted RBP12.26□□□□□ -0.45
PCDHA11-201ENST00000398640 CEACAM18A8MTB9 384 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 WISP3O95389 354 aaPredicted RBP12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 RPL27AP46776 148 aaKnown RBP12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 LAMTOR1Q6IAA8 161 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 UNQ9370/PRO34162Q6UXP9 181 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF207O43670 478 aaKnown RBP12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 PITPNC1Q9UKF7 332 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 LMX1BO60663 402 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 APCSP02743 223 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 FCGR3AP08637 254 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 NANOS3P60323 173 aaKnown RBP12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 ELOBQ15370 118 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 RBM38Q9H0Z9 239 aaKnown RBP12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 FUT9Q9Y231 359 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 M0R3E3 92 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 HYPMO75409 117 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF735P0CB33 412 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 FAM27E3Q08E93 113 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 HPRT1P00492 218 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 IGKV3-20P01619 116 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 THY1P04216 161 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 SULT1A2P50226 295 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 FAM27BQ5VT28 67 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 C8orf82Q6P1X6 216 aaPredicted RBP12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 ZBTB34Q8NCN2 500 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 OR8G5Q8NG78 346 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 SNX22Q96L94 193 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 HSF4Q9ULV5 492 aa12.25□□□□□ -0.45
PCDHA11-201ENST00000398640 RCC1P18754 421 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 GCSHP23434 173 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 CXorf66Q5JRM2 361 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 MRPL14Q6P1L8 145 aaKnown RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 PCSK4Q6UW60 755 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 ST6GAL2Q96JF0 529 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 LOC102724200A0A096LPH7 203 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 SCTP09683 121 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 PNKDQ8N490 385 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF703Q9H7S9 590 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 TRAV20A0A0B4J274 112 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 IGKV3OR2-268A0A0C4DH90 116 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 MGST3O14880 152 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 PDE6DO43924 150 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 DEDDO75618 318 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 UMODP07911 640 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 IGLV3-21P80748 117 aaPredicted RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 ATP5G2Q06055 141 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 SMUG1Q53HV7 270 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 AMMECR1LQ6DCA0 310 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 IL36RNQ9UBH0 155 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 SNURFLB1AK76 121 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 C4orf51C9J302 202 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 CORTO00230 105 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 REG1AP05451 166 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 PGA4P0DJD7 388 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 VSIG10L2P0DP72 767 aa12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
PCDHA11-201ENST00000398640 IFI6P09912 130 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 CD81P60033 236 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 ZP4Q12836 540 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 RAX2Q96IS3 184 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 TMEM191AQ9H0A3 160 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 PDCD11Q14690 1871 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 A0A1W2PP11 408 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 OR1N2Q8NGR9 330 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 FAM168AQ92567 244 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 FNDC1Q4ZHG4 1894 aaPredicted RBP12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 A0A1W2PS18 150 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 IFNL4K9M1U5 179 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 CA11O75493 328 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 MPV17P39210 176 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 SNAI3Q3KNW1 292 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 FAM106AQ4KMX7 169 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 OR52M1Q8NGK5 317 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 TCF20Q9UGU0 1960 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 FOXH1O75593 365 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 ASAH2BP0C7U1 165 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 OR10J1P30954 320 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 HOGA1Q86XE5 327 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 ABHD12Q8N2K0 398 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 LYRM2Q9NU23 88 aaPredicted RBP12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 SIRT4Q9Y6E7 314 aaPredicted RBP12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 MMP16P51512 607 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 TBX15Q96SF7 602 aa12.23□□□□□ -0.45
PCDHA11-201ENST00000398640 RECKO95980 971 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 TGFAP01135 160 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 GPHA2Q96T91 129 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 C19orf54Q5BKX5 351 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 ARL6IP6Q8N6S5 226 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 PTP4A3O75365 173 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF324O75467 553 aaPredicted RBP12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 CDKN1AP38936 164 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms