RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 OR5R1Q8NH85 324 aa20.4■□□□□ 0.86
U2AF1-203ENST00000398137 LINC01006Q8NI28 216 aa20.4■□□□□ 0.86
U2AF1-203ENST00000398137 PIFOQ8TCI5 191 aa20.4■□□□□ 0.86
U2AF1-203ENST00000398137 PIPOXQ9P0Z9 390 aa20.4■□□□□ 0.86
U2AF1-203ENST00000398137 OR2W1Q9Y3N9 320 aa20.4■□□□□ 0.86
U2AF1-203ENST00000398137 RBM7Q9Y580 266 aaKnown RBP20.4■□□□□ 0.86
U2AF1-203ENST00000398137 IGHV1-3A0A0C4DH29 117 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 RAB29O14966 203 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 CD24P25063 80 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 FCGR2CP31995 323 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 GPR12P47775 334 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 RFX2P48378 723 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 DYNLT3P51808 116 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF79Q15937 498 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 PYDC2Q56P42 97 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF833PQ6ZTB9 187 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 MOB3BQ86TA1 216 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 CITED1Q99966 193 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 MRPL20Q9BYC9 149 aaKnown RBP20.39■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF221Q9UK13 617 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 VPREB3Q9UKI3 123 aa20.39■□□□□ 0.85
U2AF1-203ENST00000398137 GSTZ1O43708 216 aaPredicted RBP20.38■□□□□ 0.85
U2AF1-203ENST00000398137 TUSC2O75896 110 aa20.38■□□□□ 0.85
U2AF1-203ENST00000398137 BRS3P32247 399 aa20.38■□□□□ 0.85
U2AF1-203ENST00000398137 CFHR4Q92496 578 aa20.38■□□□□ 0.85
U2AF1-203ENST00000398137 PTTG2Q9NZH5 202 aa20.38■□□□□ 0.85
U2AF1-203ENST00000398137 IGHV3-72A0A0B4J1Y9 119 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 IGKV1D-13A0A0B4J2D9 117 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF736B4DX44 427 aaPredicted RBP20.37■□□□□ 0.85
U2AF1-203ENST00000398137 M0QYG6 137 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 TXNL1O43396 289 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 IGKV1-13P0DP09 117 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 AADACP22760 399 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 ETV6P41212 452 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 Q6ZSV7 163 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 OVCH2Q7RTZ1 564 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 S1PR3Q99500 378 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF251Q9BRH9 671 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 TCF19Q9Y242 345 aa20.37■□□□□ 0.85
U2AF1-203ENST00000398137 LUMP51884 338 aaPredicted RBP20.36■□□□□ 0.85
U2AF1-203ENST00000398137 PROK1P58294 105 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 SSBP1Q04837 148 aaKnown RBP20.36■□□□□ 0.85
U2AF1-203ENST00000398137 DYRK1AQ13627 763 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 FBLN7Q53RD9 439 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 ACTBL2Q562R1 376 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 TREML4Q6UXN2 200 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 CAPSLQ8WWF8 208 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 C5orf30Q96GV9 206 aa20.36■□□□□ 0.85
U2AF1-203ENST00000398137 RBMX2Q9Y388 322 aaKnown RBP20.36■□□□□ 0.85
U2AF1-203ENST00000398137 PPYP01298 95 aa20.35■□□□□ 0.85
U2AF1-203ENST00000398137 CD3DP04234 171 aa20.35■□□□□ 0.85
U2AF1-203ENST00000398137 PTBP1P26599 531 aaKnown RBP eCLIP20.35■□□□□ 0.85
U2AF1-203ENST00000398137 FAM71F2Q6NXP2 309 aa20.35■□□□□ 0.85
U2AF1-203ENST00000398137 TMEM219Q86XT9 240 aa20.35■□□□□ 0.85
U2AF1-203ENST00000398137 GHITMQ9H3K2 345 aa20.35■□□□□ 0.85
U2AF1-203ENST00000398137 RNF114Q9Y508 228 aa20.35■□□□□ 0.85
U2AF1-203ENST00000398137 M0R1X1 148 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 KCNAB3O43448 404 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 SNRNP70P08621 437 aaKnown RBP20.34■□□□□ 0.85
U2AF1-203ENST00000398137 FXYD4P59646 89 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 RNASE10Q5GAN6 216 aaKnown RBP20.34■□□□□ 0.85
U2AF1-203ENST00000398137 TMEM229BQ8NBD8 167 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.34■□□□□ 0.85
U2AF1-203ENST00000398137 GIMAP1Q8WWP7 306 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 RBMXL1Q96E39 390 aaKnown RBP20.34■□□□□ 0.85
U2AF1-203ENST00000398137 NABP2Q9BQ15 211 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF2Q9BSG1 426 aaPredicted RBP20.34■□□□□ 0.85
U2AF1-203ENST00000398137 TINAGL1Q9GZM7 467 aaPredicted RBP20.34■□□□□ 0.85
U2AF1-203ENST00000398137 SDHAF2Q9NX18 166 aa20.34■□□□□ 0.85
U2AF1-203ENST00000398137 A6NDX4 124 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 PROP1O75360 226 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 CSF1P09603 554 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 TBPP20226 339 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 TAS2R19P59542 299 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 HERV-K104P61576 105 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 LSAMPQ13449 338 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 HABP2Q14520 560 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-203ENST00000398137 VAX1Q5SQQ9 334 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 ZNF660Q6AZW8 331 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-203ENST00000398137 CCBE1Q6UXH8 406 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-203ENST00000398137 Q8N402 240 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 DRAXINQ8NBI3 349 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-203ENST00000398137 SRRQ9GZT4 340 aa20.33■□□□□ 0.85
U2AF1-203ENST00000398137 FAM90A9PA6NNJ1 464 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 CHST1O43916 411 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 IGKV1D-33P01593 117 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 IGKV1-33P01594 117 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 CD74P04233 296 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 HES1Q14469 280 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 STEAP1BQ6NZ63 245 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 GLDNQ6ZMI3 551 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-203ENST00000398137 TMEM17Q86X19 198 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 ZNF645Q8N7E2 425 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 OR4D10Q8NGI6 311 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 SECTM1Q8WVN6 248 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 TRIM63Q969Q1 353 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 THAP7Q9BT49 309 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-203ENST00000398137 C16orf95Q9H693 158 aa20.32■□□□□ 0.84
U2AF1-203ENST00000398137 ZNF107Q9UII5 783 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-203ENST00000398137 WNK1Q9H4A3 2382 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms