RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PEF1Q9UBV8 284 aaKnown RBP7.09□□□□□ -1.27
NEDD9-203ENST00000397378 SLC23A1Q9UHI7 598 aa7.09□□□□□ -1.27
NEDD9-203ENST00000397378 WASHC3Q9Y3C0 194 aa7.09□□□□□ -1.27
NEDD9-203ENST00000397378 LRRC42Q9Y546 428 aa7.09□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF785A8K8V0 405 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 OR11H12B2RN74 326 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 H7C2Y5 167 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 GYG2O15488 501 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 XRCC3O43542 346 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 AIREO43918 545 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 GPX5O75715 221 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 SPDEFO95238 335 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 CA2P00918 260 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 CD7P09564 240 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 FUT3P21217 361 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 ARPC4P59998 168 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 PSG5Q15238 335 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 RPEL1Q2QD12 228 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 DMKNQ6E0U4 476 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-203ENST00000397378 SIGIRRQ6IA17 410 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 C5orf24Q7Z6I8 188 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 AMIGO2Q86SJ2 522 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 DEFB125Q8N687 156 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
NEDD9-203ENST00000397378 PHLDA1Q8WV24 401 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-203ENST00000397378 TMEM68Q96MH6 324 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 CLCC1Q96S66 551 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
NEDD9-203ENST00000397378 ZNF184Q99676 751 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-203ENST00000397378 SRD5A3Q9H8P0 318 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 ERVK13-1Q9NX77 482 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 PEMTQ9UBM1 199 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
NEDD9-203ENST00000397378 UBE2QL1A1L167 161 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 ITGB1BP1O14713 200 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 TRBV12-3P01733 135 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 FCGR1AP12314 374 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 IGFBP3P17936 291 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-203ENST00000397378 RIPK1Q13546 671 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 DYRK1AQ13627 763 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 FXYD3Q14802 87 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 HMGN3Q15651 99 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 CD300EQ496F6 205 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-203ENST00000397378 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 RPL39P5Q59GN2 51 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 C6orf141Q5SZD1 244 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 RPL22L1Q6P5R6 122 aaKnown RBP7.07□□□□□ -1.28
NEDD9-203ENST00000397378 GLDNQ6ZMI3 551 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-203ENST00000397378 ZNF575Q86XF7 245 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 OR5T1Q8NG75 326 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 GRPEL2Q8TAA5 225 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 SNAPC3Q92966 411 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 Q96M66 194 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 OVOL2Q9BRP0 275 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 TINAGL1Q9GZM7 467 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-203ENST00000397378 WFDC10AQ9H1F0 79 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 STEAP1Q9UHE8 339 aa7.07□□□□□ -1.28
NEDD9-203ENST00000397378 ST8SIA5O15466 376 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 NDUFB8O95169 186 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 MGMTP16455 207 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 VAMP1P23763 118 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 SSBP2P81877 361 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-203ENST00000397378 GLIPR1L1Q6UWM5 242 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 LYG2Q86SG7 212 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 CCDC197Q8NCU1 140 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 BVESQ8NE79 360 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 RNF183Q96D59 192 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 CENPNQ96H22 339 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-203ENST00000397378 AGMATQ9BSE5 352 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 SELENOIQ9C0D9 397 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 ZC4H2Q9NQZ6 224 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 OAZ3Q9UMX2 235 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 AP4S1Q9Y587 144 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
NEDD9-203ENST00000397378 HSPG2P98160 4391 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 A0A0B4J203 849 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 PDCD6O75340 191 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 IGKV1-16P04430 117 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 CPEP16870 476 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 GABRB1P18505 474 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 ATF4P18848 351 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-203ENST00000397378 CAPGP40121 348 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 TNFRSF9Q07011 255 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 DEFB114Q30KQ6 69 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 XAF1Q6GPH4 301 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 PDPNQ86YL7 162 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 WFDC3Q8IUB2 231 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 CDH26Q8IXH8 852 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 MUL1Q969V5 352 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 SLC7A6OSQ96CW6 309 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-203ENST00000397378 ORAI1Q96D31 301 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 ABHD14BQ96IU4 210 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 CYYR1Q96J86 154 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 SULT4A1Q9BR01 284 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 BANF2Q9H503 90 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 MRPS18AQ9NVS2 196 aaKnown RBP7.05□□□□□ -1.28
NEDD9-203ENST00000397378 ABRACLQ9P1F3 81 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 AASSQ9UDR5 926 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms