RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 C10orf105Q8TEF2 133 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 RBPMSQ93062 196 aaKnown RBP10.39□□□□□ -0.75
TRIM39-204ENST00000396548 HSD17B10Q99714 261 aaKnown RBP10.39□□□□□ -0.75
TRIM39-204ENST00000396548 LIN7CQ9NUP9 197 aaKnown RBP10.39□□□□□ -0.75
TRIM39-204ENST00000396548 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 TMED3Q9Y3Q3 217 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 RNF212BA8MTL3 300 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 RAMP3O60896 148 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 PPIAL4GP0DN37 164 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 SLC25A4P12235 298 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 GPR12P47775 334 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 PDLIM4P50479 330 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 TCTEX1D1Q8N7M0 179 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 PPP1R1CQ8WVI7 109 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 GSX2Q9BZM3 304 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 METTL8Q9H825 291 aaKnown RBP10.39□□□□□ -0.75
TRIM39-204ENST00000396548 SESN1Q9Y6P5 492 aa10.39□□□□□ -0.75
TRIM39-204ENST00000396548 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 ZNF137PP52743 207 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 KRTAP10-9P60411 292 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 GNB2P62879 340 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 ZNF833PQ6ZTB9 187 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 RNF126Q9BV68 326 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 A0A0G2JRQ6 117 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 C5orf51A6NDU8 294 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 HMSDA8MTL9 139 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 FAM25EA8MYX2 175 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 RAB29O14966 203 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 LGALSLQ3ZCW2 172 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-204ENST00000396548 OR4D5Q8NGN0 318 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 ST6GALNAC6Q969X2 333 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 TMEM133Q9H2Q1 129 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 USP9YO00507 2555 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-204ENST00000396548 H0YIZ8 118 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 IGKV1-5P01602 117 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 GNG10P50151 68 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 CYCSP99999 105 aaKnown RBP10.38□□□□□ -0.75
TRIM39-204ENST00000396548 NCR3LG1Q68D85 454 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 NARFLQ9H6Q4 476 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 PLSCR3Q9NRY6 295 aa10.38□□□□□ -0.75
TRIM39-204ENST00000396548 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-204ENST00000396548 J3QR06 171 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 NDUFS8O00217 210 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 MPC2O95563 127 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 C11orf87Q6NUJ2 197 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 TMEM65Q6PI78 240 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 ZNF695Q8IW36 515 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 PDCD10Q9BUL8 212 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 BARX1Q9HBU1 254 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-204ENST00000396548 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 LOC105371242A0A075B767 164 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 PITX3O75364 302 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 LIPFP07098 398 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 RPA2P15927 270 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 VDAC1P21796 283 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 FGL1Q08830 312 aa10.37□□□□□ -0.75
TRIM39-204ENST00000396548 LSM10Q969L4 123 aaKnown RBP10.37□□□□□ -0.75
TRIM39-204ENST00000396548 IGLV1-47P01700 117 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 SLC25A6P12236 298 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 CXCL2P19875 107 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 PSMB6P28072 239 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 IAH1Q2TAA2 248 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-204ENST00000396548 ZNF787Q6DD87 383 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 KIR3DL3Q8N743 410 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 M0R1W7 72 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 IFNA21P01568 189 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 ESCO2Q56NI9 601 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 HCP5Q6MZN7 132 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 C1orf122Q6ZSJ8 110 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 MALRD1Q5VYJ5 2156 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 A0A1W2PPH5 198 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 CT45A6P0DMU7 189 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 CT45A5P0DMU8 189 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 CT45A7P0DMV0 189 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 LPAR6P43657 344 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 CATR1Q13166 79 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 Q6ZRM9 215 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 ZNF383Q8NA42 475 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 TCTEX1D2Q8WW35 142 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 FAM168AQ92567 244 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 GPR146Q96CH1 333 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 RAB39BQ96DA2 213 aa10.36□□□□□ -0.75
TRIM39-204ENST00000396548 IGHV2-26A0A0B4J1V2 119 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 M0R1X1 148 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 RBFOX2O43251 390 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRIM39-204ENST00000396548 SERPINE2P07093 398 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 ATP5J2P56134 94 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 DLX1P56177 255 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 IFITM2Q01629 132 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 LYG1Q8N1E2 194 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 ABHD12Q8N2K0 398 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 OR9G1Q8NH87 305 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms