RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IL3RAP26951 378 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 TDGF1P3P51864 188 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 DAZ2Q13117 558 aaKnown RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 NSDHLQ15738 373 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 KCNJ8Q15842 424 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 ABCA11PQ4W5N1 156 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 UBE2NLQ5JXB2 153 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 FAM182AQ5T1J6 154 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 SBSNQ6UWP8 590 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 ACP7Q6ZNF0 438 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 DAZ4Q86SG3 579 aaKnown RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 TMEM75Q8N9X5 138 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 OR8B12Q8NGG6 310 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 LHFPL5Q8TAF8 219 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 LMO3Q8TAP4 145 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 GNPDA2Q8TDQ7 276 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 MRPL48Q96GC5 212 aaKnown RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 THSD7BQ9C0I4 1608 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 OR52D1Q9H346 318 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 FAM96AQ9H5X1 160 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 YTHDC2Q9H6S0 1430 aaKnown RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 TPT1P8Q9HAU6 139 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 DAZ1Q9NQZ3 744 aaKnown RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 PARP11Q9NR21 331 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 DAZ3Q9NR90 486 aaKnown RBP3.65□□□□□ -1.83
GABPB1-204ENST00000396464 LINC00527Q9UJ94 153 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 PXMP4Q9Y6I8 212 aa3.65□□□□□ -1.83
GABPB1-204ENST00000396464 PLA2R1Q13018 1463 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 RALGAPBQ86X10 1494 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 TMEM2Q9UHN6 1383 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 SOCS3O14543 225 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 ANGPTL7O43827 346 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 IGHV3-23P01764 117 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 SPI1P17947 270 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 OGNP20774 298 aaKnown RBP3.64□□□□□ -1.83
GABPB1-204ENST00000396464 GATA2P23769 480 aaPredicted RBP3.64□□□□□ -1.83
GABPB1-204ENST00000396464 GABRR1P24046 479 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 CDK2P24941 298 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 RPS20P60866 119 aaKnown RBP3.64□□□□□ -1.83
GABPB1-204ENST00000396464 HERVK_113P61574 105 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
GABPB1-204ENST00000396464 IL15RAQ13261 267 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF876PQ49A33 203 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 C9orf64Q5T6V5 341 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 GLYATQ6IB77 296 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF773Q6PK81 442 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 LY6G5BQ8NDX9 201 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 C2orf88Q9BSF0 95 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 CCDC32Q9BV29 185 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 PARP12Q9H0J9 701 aaKnown RBP3.64□□□□□ -1.83
GABPB1-204ENST00000396464 TMEM222Q9H0R3 208 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 NOX3Q9HBY0 568 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 ACER3Q9NUN7 267 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 SSR3Q9UNL2 185 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 KNDC1Q76NI1 1749 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 ARHGEF28Q8N1W1 1705 aaKnown RBP3.64□□□□□ -1.83
GABPB1-204ENST00000396464 SLIT1O75093 1534 aa3.64□□□□□ -1.83
GABPB1-204ENST00000396464 SPATA31E1Q6ZUB1 1445 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 BAZ2AQ9UIF9 1905 aaKnown RBP3.63□□□□□ -1.83
GABPB1-204ENST00000396464 TMED7-TICAM2A0A0A6YYA0 188 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 KNCNA6PVL3 124 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CD300LBA8K4G0 201 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 E7EQ34 232 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 TMEM250H0YL14 139 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CD5LO43866 347 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 EIF1BO60739 113 aaKnown RBP3.63□□□□□ -1.83
GABPB1-204ENST00000396464 SULT1C4O75897 302 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CDRT1O95170 752 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 GAS8-AS1O95177 125 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CCNE2O96020 404 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 OR4Q2P0C623 313 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 COX4I1P13073 169 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CPMP14384 443 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 EIF1P41567 113 aaKnown RBP3.63□□□□□ -1.83
GABPB1-204ENST00000396464 NCALDP61601 193 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 SNRPD2P62316 118 aaKnown RBP3.63□□□□□ -1.83
GABPB1-204ENST00000396464 TBPL1P62380 186 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 SSX1Q16384 188 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 TCTEX1D4Q5JR98 221 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CEMP1Q6PRD7 247 aaPredicted RBP3.63□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF497Q6ZNH5 498 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 IDO2Q6ZQW0 420 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 LINC00596Q86U02 117 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 OR4D11Q8NGI4 311 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 OR10G4Q8NGN3 311 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 CT55Q8WUE5 264 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 PTX4Q96A99 478 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 ROPN1LQ96C74 230 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 L3HYPDHQ96EM0 354 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 C18orf15Q96N68 181 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 ATOH8Q96SQ7 321 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 TIMM17AQ99595 171 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 VPS25Q9BRG1 176 aa3.63□□□□□ -1.83
GABPB1-204ENST00000396464 EIF5A2Q9GZV4 153 aaKnown RBP3.63□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF331Q9NQX6 463 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms