RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 LRRC30A6NM36 301 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 J3QW42 95 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 HAND1O96004 215 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 RPL23P62829 140 aaKnown RBP13.19□□□□□ -0.3
HOXA3-202ENST00000396352 TMEM241Q24JQ0 296 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 GPR87Q9BY21 358 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 HES4Q9HCC6 221 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 GFOD1Q9NXC2 390 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 C12orf77C9JDV5 145 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 GPX4P36969 197 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-202ENST00000396352 ZNF816Q0VGE8 651 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-202ENST00000396352 GAMTQ14353 236 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 GATAD1Q8WUU5 269 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 PACRGQ96M98 296 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-202ENST00000396352 SRD5A3Q9H8P0 318 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 S1PR2O95136 353 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 OR3A1P47881 315 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
HOXA3-202ENST00000396352 TMEM147Q9BVK8 224 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 PITPNC1Q9UKF7 332 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 USF3Q68DE3 2245 aa13.18□□□□□ -0.3
HOXA3-202ENST00000396352 CTXND1A0A1B0GTU2 59 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 NDUFS6O75380 124 aaKnown RBP13.17□□□□□ -0.3
HOXA3-202ENST00000396352 BSXQ3C1V8 233 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 OR52L2PQ8NGH6 319 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 PARLQ9H300 379 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 C21orf140B9A014 251 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 GZMHP20718 246 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 HOXA4Q00056 320 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-202ENST00000396352 TFF3Q07654 80 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 ZNF808Q8N4W9 903 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-202ENST00000396352 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 GALMQ96C23 342 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 SPRR3Q9UBC9 169 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 PTPRBP23467 1997 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 TMEM30CPA0ZSE6 113 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 GRPP07492 148 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 PSMB3P49720 205 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 MSMO1Q15800 293 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 ATP6V1FQ16864 119 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 NECAP1Q8NC96 275 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
HOXA3-202ENST00000396352 KLF13Q9Y2Y9 288 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-202ENST00000396352 C17orf98A8MV24 154 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 IQCF6A8MYZ5 107 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 ZG16O60844 167 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 FGF7P21781 194 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 DEFA6Q01524 100 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 C1orf210Q8IVY1 113 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 SLC25A40Q8TBP6 338 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 DEFB127Q9H1M4 99 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
HOXA3-202ENST00000396352 KCNIP1Q9NZI2 227 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 COL10A1Q03692 680 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 PSG7Q13046 419 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 RTP5Q14D33 572 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 RHOVQ96L33 236 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 MRPL37Q9BZE1 423 aaKnown RBP13.16□□□□□ -0.3
HOXA3-202ENST00000396352 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
HOXA3-202ENST00000396352 WNT9BO14905 357 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 LY86O95711 162 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 RAC2P15153 192 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 IDH3GP51553 393 aaPredicted RBP13.15□□□□□ -0.3
HOXA3-202ENST00000396352 GABRA6Q16445 453 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 FFAR4Q5NUL3 377 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 Q6ZR03 302 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 DTD1Q8TEA8 209 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 ELOVL1Q9BW60 279 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 NPCDR1Q9BY65 106 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 GAB2Q9UQC2 676 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 HBZP02008 142 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 AESQ08117 197 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 BTNL3Q6UXE8 466 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 COQ2Q96H96 371 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 C14orf144Q96I85 54 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
HOXA3-202ENST00000396352 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 UFSP2Q9NUQ7 469 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 KLRC4-KLRK1H3BQV0 150 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 MBP02144 154 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 IL2RGP31785 369 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 GALR1P47211 349 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 SLC35E4Q6ICL7 350 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 OR4F4Q96R69 305 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
HOXA3-202ENST00000396352 OOEPA6NGQ2 149 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms