RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 BTNL3Q6UXE8 466 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 CD300LFQ8TDQ1 290 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 YPEL2Q96QA6 119 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 AIFM2Q9BRQ8 373 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 USF3Q68DE3 2245 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 ZFHX4Q86UP3 3567 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 A0A1B0GV50 99 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 LINC00473A8K010 186 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 ST8SIA5O15466 376 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 RAB2AP61019 212 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 SERF2P84101 59 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 Q3ZCU0 254 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 MORN2Q502X0 79 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 AWAT1Q58HT5 328 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 OR2B11Q5JQS5 317 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 ZNF506Q5JVG8 444 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 SPANXN5Q5MJ07 72 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 ALKBH2Q6NS38 261 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 ITLN1Q8WWA0 313 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 RARRES2Q99969 163 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 MRPL37Q9BZE1 423 aaKnown RBP13.97□□□□□ -0.17
NUP50-202ENST00000396096 TUBA4BQ9H853 241 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 CACNA1DQ01668 2161 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 FRYQ5TBA9 3013 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 COLCA2A8K830 154 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 SPRY3O43610 288 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 TDGF1P3P51864 188 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 LILRB2Q8N423 598 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 C15orf54Q8N8G6 183 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 C14orf79Q96F83 325 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 WDR61Q9GZS3 305 aaKnown RBP13.96□□□□□ -0.17
NUP50-202ENST00000396096 EGLN1Q9GZT9 426 aa13.96□□□□□ -0.17
NUP50-202ENST00000396096 IGHV3OR15-7A0A075B7D8 119 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 C7orf77A4D0Y5 90 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 ITGB1BP1O14713 200 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 CGB3P0DN86 165 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 CGB7P0DN87 165 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 SLC38A11Q08AI6 406 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 FAM27E3Q08E93 113 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 RHEBQ15382 184 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 MRGPRGQ86SM5 289 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 NUP37Q8NFH4 326 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 SFT2D1Q8WV19 159 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 MBD3L1Q8WWY6 194 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 OR4C12Q96R67 309 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 RSG1Q9BU20 258 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 UNKLQ9H9P5 680 aaKnown RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 IL19Q9UHD0 177 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 PRELID3BQ9Y3B1 194 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 TIMM9Q9Y5J7 89 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 DMXL1Q9Y485 3027 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 MEX3AA1L020 520 aaKnown RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 FAM90A9PA6NNJ1 464 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 DEFB108AA8MXU0 73 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 HSPB1P04792 205 aaKnown RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 SRP19P09132 144 aaKnown RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 FOLR2P14207 255 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 CD40P25942 277 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 DUTP33316 252 aaKnown RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 GPR12P47775 334 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 LOXL3P58215 753 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 SELENOVP59797 346 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 ICAM4Q14773 271 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 ATP6V1FQ16864 119 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 AARDQ4LEZ3 155 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 VHLLQ6RSH7 139 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 H2BFWTQ7Z2G1 175 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 CENPVQ7Z7K6 275 aaPredicted RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 CLDND2Q8NHS1 167 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 RXFP4Q8TDU9 374 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 CIB3Q96Q77 187 aaPredicted RBP13.95□□□□□ -0.18
NUP50-202ENST00000396096 RPS10P5Q9NQ39 176 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
NUP50-202ENST00000396096 PROP1O75360 226 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 SCAF4O95104 1147 aaKnown RBP13.94□□□□□ -0.18
NUP50-202ENST00000396096 OR13C7P0DN81 318 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 CCKARP32238 428 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 AVPI1Q5T686 147 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 ETV3LQ6ZN32 361 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 C22orf34Q6ZV56 151 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 ZNF561Q8N587 486 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 Q8TCH9 128 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 SDSLQ96GA7 329 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 RAB9BQ9NP90 201 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 RPRMQ9NS64 109 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 ELOVL5Q9NYP7 299 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 RNF7Q9UBF6 113 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 GNG12Q9UBI6 72 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 MLXQ9UH92 298 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 GAB2Q9UQC2 676 aa13.94□□□□□ -0.18
NUP50-202ENST00000396096 PMS2P5A8MQ11 134 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 RBFOX2O43251 390 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUP50-202ENST00000396096 IGHV1-46P01743 117 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 KHDC3LQ587J8 217 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 NCR3LG1Q68D85 454 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 DOLPP1Q86YN1 238 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 ZNRF1Q8ND25 227 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUP50-202ENST00000396096 PINX1Q96BK5 328 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms