RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 UBE2G2P60604 165 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 Q6P435 159 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 Q6ZRM9 215 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 SVBPQ8N300 66 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 GCSAMQ8N6F7 178 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 EDARADDQ8WWZ3 215 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 PRELID1Q9Y255 219 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 USP9XQ93008 2570 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 DBX1A6NMT0 343 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 FOXI3A8MTJ6 420 aaPredicted RBP13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 ZG16O60844 167 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 TSPAN9O75954 239 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 S100A6P06703 90 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 RPL30P62888 115 aaKnown RBP13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 MRPS11P82912 194 aaKnown RBP13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 PDLIM3Q53GG5 364 aaPredicted RBP13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 SOHLH1Q5JUK2 328 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 MOB1BQ7L9L4 216 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 R3HDM4Q96D70 268 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 WFIKKN1Q96NZ8 548 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 SFXN3Q9BWM7 321 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 KALRNO60229 2985 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 CA11O75493 328 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 CD3EP07766 207 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 PAX6P26367 422 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 COQ2Q96H96 371 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 WFDC1Q9HC57 220 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 ABCA12Q86UK0 2595 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 TRBV6-7A0A0A0MS04 114 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM74A7A6NL05 159 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 PPIHO43447 177 aaKnown RBP13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 PLAUP00749 431 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 HNF1AP20823 631 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 PJVKQ0ZLH3 352 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM74A3Q4VXF1 159 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 OR10P1Q8NGE3 313 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
SMARCD1-202ENST00000394963 TMPRSS3P57727 454 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 GUK1Q16774 197 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 NCR3LG1Q68D85 454 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 PCSK4Q6UW60 755 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 ZNF497Q6ZNH5 498 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 GALNT14Q96FL9 552 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 AQP10Q96PS8 301 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 IGHV3-21A0A0B4J1V1 117 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A10PA6NDY2 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 MBD3L4A6NDZ8 208 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A18PA6NE21 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 MBD3L3A6NE82 208 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A16PA6NEW6 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 MFSD2BA6NFX1 497 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A20PA6NIJ5 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 MBD3L5A6NJ08 208 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A7PA6NKC0 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A22PA8MWA6 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A12PA8MX19 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A5PA8MXJ8 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A23PA8MXZ1 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 CDS2O95674 445 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A15PP0C7V4 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A13PP0C7W8 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A14PP0C7W9 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A24PP0C7X0 464 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 RPL35P42766 123 aaKnown RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 F2RL1P55085 397 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 MBD3L2Q8NHZ7 208 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 STRAPQ9Y3F4 350 aaKnown RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 ZNF462Q96JM2 2506 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 NDUFB3O43676 98 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 HES1Q14469 280 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 ZNF324BQ6AW86 544 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 ASB13Q8WXK3 278 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 TMEM204Q9BSN7 226 aa13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 SLC25A10Q9UBX3 287 aaPredicted RBP13.31□□□□□ -0.28
SMARCD1-202ENST00000394963 FASNP49327 2511 aaKnown RBP13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 COL5A1P20908 1838 aaPredicted RBP13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 DPRXA6NFQ7 191 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 UMAD1C9J7I0 102 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 H0Y980 276 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 PLA2G5P39877 138 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 SLC38A11Q08AI6 406 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM90A1Q86YD7 464 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 SSMEM1Q8WWF3 244 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 RARRES2Q99969 163 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 UQCC1Q9NVA1 299 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 CALYQ9NYX4 217 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 MGST3O14880 152 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 ARG1P05089 322 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 GZMHP20718 246 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 GCM1Q9NP62 436 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 AURKAIP1Q9NWT8 199 aaPredicted RBP13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 LAMP3Q9UQV4 416 aa13.3□□□□□ -0.28
SMARCD1-202ENST00000394963 CHD3Q12873 2000 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms