RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 MS4A18Q3C1V0 323 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 BHLHA15Q7RTS1 189 aaPredicted RBP14.85□□□□□ -0.03
SIN3A-203ENST00000394949 TGIF2LYQ8IUE0 185 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 ORM1P02763 201 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 IL11P20809 199 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 PSG4Q00888 419 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 ZNF645Q8N7E2 425 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 RND1Q92730 232 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 LOC102724200A0A096LPH7 203 aaPredicted RBP14.85□□□□□ -0.03
SIN3A-203ENST00000394949 TRAV39A0A0B4J263 110 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 FABP2P12104 132 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 FOLR2P14207 255 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 C5orf52A6NGY3 159 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 SELENOTP62341 195 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 PMS2CLQ68D20 193 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 CEP250Q9BV73 2442 aa14.85□□□□□ -0.03
SIN3A-203ENST00000394949 SRP19P09132 144 aaKnown RBP14.84□□□□□ -0.03
SIN3A-203ENST00000394949 FGFRL1Q8N441 504 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 FLYWCH2Q96CP2 140 aaKnown RBP14.84□□□□□ -0.03
SIN3A-203ENST00000394949 HARBI1Q96MB7 349 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 OR51B2Q9Y5P1 312 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 FGF16O43320 207 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 LEPROTL1O95214 131 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 CYP2G1PQ6ZSU1 146 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 GBGT1Q8N5D6 347 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 LOC390937A0A1W2PQ73 354 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 PATE3B3GLJ2 98 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 IGHV3-13P01766 116 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 IGHV3-7P01780 117 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 TNFRSF9Q07011 255 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 INO80CQ6PI98 192 aaPredicted RBP14.84□□□□□ -0.03
SIN3A-203ENST00000394949 NR2C2APQ86WQ0 139 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 ABHD3Q8WU67 409 aa14.84□□□□□ -0.03
SIN3A-203ENST00000394949 ZNF501Q96CX3 271 aaPredicted RBP14.84□□□□□ -0.03
SIN3A-203ENST00000394949 RPL30P62888 115 aaKnown RBP14.83□□□□□ -0.03
SIN3A-203ENST00000394949 SSX8Q7RTT4 187 aa14.83□□□□□ -0.03
SIN3A-203ENST00000394949 OR10S1Q8NGN2 331 aa14.83□□□□□ -0.03
SIN3A-203ENST00000394949 MYOZ3Q8TDC0 251 aa14.83□□□□□ -0.03
SIN3A-203ENST00000394949 SPSB4Q96A44 273 aa14.83□□□□□ -0.03
SIN3A-203ENST00000394949 GRAMD2BQ96HH9 432 aa14.83□□□□□ -0.03
SIN3A-203ENST00000394949 RASL11BQ9BPW5 248 aa14.83□□□□□ -0.03
SIN3A-203ENST00000394949 UBE2CO00762 179 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 PSMB2P49721 201 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 C1orf174Q8IYL3 243 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 NEUROG3Q9Y4Z2 214 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 F8VVB4 439 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 F8VWA3 439 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 IGLV3-21P80748 117 aaPredicted RBP14.83□□□□□ -0.04
SIN3A-203ENST00000394949 PKIBQ9C010 78 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 CLDN14O95500 239 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 SOD3P08294 240 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 RPL7P18124 248 aaKnown RBP14.83□□□□□ -0.04
SIN3A-203ENST00000394949 CLDN18P56856 261 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 PLP1P60201 277 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 AESQ08117 197 aa14.83□□□□□ -0.04
SIN3A-203ENST00000394949 SH2D7A6NKC9 451 aaPredicted RBP14.82□□□□□ -0.04
SIN3A-203ENST00000394949 ZNF137PP52743 207 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
SIN3A-203ENST00000394949 GLRX5Q86SX6 157 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 PMCHL2Q9BQD1 86 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 SRSF9Q13242 221 aaKnown RBP eCLIP14.82□□□□□ -0.04
SIN3A-203ENST00000394949 TGIF1Q15583 401 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 FBXW9Q5XUX1 488 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 SNRNP40Q96DI7 357 aaKnown RBP14.82□□□□□ -0.04
SIN3A-203ENST00000394949 SFRP2Q96HF1 295 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 SFXN3Q9BWM7 321 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 RNF7Q9UBF6 113 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 IL36RNQ9UBH0 155 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 A0A0J9YW62 118 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 MS4A5Q9H3V2 200 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 TRIP12Q14669 1992 aaPredicted RBP14.82□□□□□ -0.04
SIN3A-203ENST00000394949 COX7A1P24310 79 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 UNC119Q13432 240 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 SLC25A40Q8TBP6 338 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 DPF1Q92782 380 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 THSD7AQ9UPZ6 1657 aa14.82□□□□□ -0.04
SIN3A-203ENST00000394949 COL5A3P25940 1745 aaPredicted RBP14.81□□□□□ -0.04
SIN3A-203ENST00000394949 SCN3AQ9NY46 2000 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 KLF7O75840 302 aaPredicted RBP14.81□□□□□ -0.04
SIN3A-203ENST00000394949 C19orf24Q9BVV8 132 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 HEXA-AS1Q9H8Q6 139 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 UFC1Q9Y3C8 167 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 MESP2Q0VG99 397 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 RPRMQ9NS64 109 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 ZDHHC8Q9ULC8 765 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 SPAARA0A1B0GVQ0 90 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 SLC35B1P78383 322 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 BIVMQ86UB2 503 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 MMD2Q8IY49 270 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 TM2D1Q9BX74 207 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 TMEM229AB2RXF0 380 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 GNG7O60262 68 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 SRIP30626 198 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 WNT5AP41221 380 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 SPRED2Q7Z698 418 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 OR5R1Q8NH85 324 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 RCC1LQ96I51 464 aaKnown RBP14.81□□□□□ -0.04
SIN3A-203ENST00000394949 NDUFAF3Q9BU61 184 aa14.81□□□□□ -0.04
SIN3A-203ENST00000394949 HYPMO75409 117 aa14.8□□□□□ -0.04
SIN3A-203ENST00000394949 HERPUD1Q15011 391 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms