RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 OOEPA6NGQ2 149 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 ARGFXA6NJG6 315 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 PDE6DO43924 150 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 NXPH2O95156 264 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 GZMBP10144 247 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 TDGF1P13385 188 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 FFAR4Q5NUL3 377 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 FBXW9Q5XUX1 488 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 ZNF66Q6ZN08 573 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 BEND4Q6ZU67 534 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 RAB1CQ92928 201 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 TAAR6Q96RI8 345 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 C2orf88Q9BSF0 95 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 SPRY4Q9C004 299 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 HES4Q9HCC6 221 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 GAB2Q9UQC2 676 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 LOXL2Q9Y4K0 774 aa8.41□□□□□ -1.06
COL17A1-203ENST00000393211 FAM90A9PA6NNJ1 464 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 TMPRSS2O15393 492 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 SLC31A2O15432 143 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 MPDU1O75352 247 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 WISP2O76076 250 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 MT-CO3P00414 261 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 GYPAP02724 150 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 CELA3AP09093 270 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 MPLP40238 635 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 OR1C1Q15619 314 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 TIPARPQ7Z3E1 657 aaKnown RBP8.4□□□□□ -1.06
COL17A1-203ENST00000393211 WDR86Q86TI4 376 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 TMEM251Q8N6I4 163 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 OR4F5Q8NH21 305 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 DTD1Q8TEA8 209 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 TMEM18Q96B42 140 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 RPUSD4Q96CM3 377 aaKnown RBP8.4□□□□□ -1.06
COL17A1-203ENST00000393211 OR4F4Q96R69 305 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 OR6C3Q9NZP0 311 aa8.4□□□□□ -1.06
COL17A1-203ENST00000393211 COL27A1Q8IZC6 1860 aaPredicted RBP8.4□□□□□ -1.07
COL17A1-203ENST00000393211 PCSK5Q92824 1860 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 ODAMA1E959 279 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 A8MWP6 167 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 IQCF6A8MYZ5 107 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 C21orf140B9A014 251 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 F6UZH7 168 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 MLNRO43193 412 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 IL18BPO95998 194 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 HAND1O96004 215 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 JMJD7P0C870 316 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 GZMHP20718 246 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 TUBG1P23258 451 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 MAGEA5P43359 124 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 NUBP1P53384 320 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 TAS2R60P59551 318 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 RAB4BP61018 213 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 PPP1CBP62140 327 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 RPP30P78346 268 aaKnown RBP8.4□□□□□ -1.07
COL17A1-203ENST00000393211 PLGLB1Q02325 96 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 AARDQ4LEZ3 155 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 ZNF766Q5HY98 468 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 TRAT1Q6PIZ9 186 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 MDP1Q86V88 176 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 PRR18Q8N4B5 295 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 NINJ1Q92982 152 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 HSD17B10Q99714 261 aaKnown RBP8.4□□□□□ -1.07
COL17A1-203ENST00000393211 SLC25A22Q9H936 323 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 TUBG2Q9NRH3 451 aa8.4□□□□□ -1.07
COL17A1-203ENST00000393211 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.07
COL17A1-203ENST00000393211 KLF13Q9Y2Y9 288 aaPredicted RBP8.4□□□□□ -1.07
COL17A1-203ENST00000393211 TRAV39A0A0B4J263 110 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 KLRC4-KLRK1H3BQV0 150 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 SMPD2O60906 423 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 KRASP01116 189 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 CD55P08174 381 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 G6PCP35575 357 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 CDC34P49427 236 aaPredicted RBP8.39□□□□□ -1.07
COL17A1-203ENST00000393211 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
COL17A1-203ENST00000393211 ERVS71-1P61550 626 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 PAX5Q02548 391 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 FOXL1Q12952 345 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 H2BFWTQ7Z2G1 175 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 RHOVQ96L33 236 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 LURAP1Q96LR2 239 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 PCGF1Q9BSM1 259 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 NDUFAF3Q9BU61 184 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 OR2D2Q9H210 308 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 KCNIP2Q9NS61 270 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 WASF3Q9UPY6 502 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 TP53TG5Q9Y2B4 290 aa8.39□□□□□ -1.07
COL17A1-203ENST00000393211 SDK1Q7Z5N4 2213 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.38□□□□□ -1.07
COL17A1-203ENST00000393211 FAM166BA8MTA8 275 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 C12orf77C9JDV5 145 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 IFNL4K9M1U5 179 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 PAGE4O60829 102 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 TNFSF15O95150 251 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 ZNF883P0CG24 379 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms