RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 H0Y980 276 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 OR7C1O76099 320 aaPredicted RBP12.73□□□□□ -0.37
SHTN1-204ENST00000392903 HPRT1P00492 218 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 SLC25A6P12236 298 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 RBM11P57052 281 aaKnown RBP12.73□□□□□ -0.37
SHTN1-204ENST00000392903 PRSS8Q16651 343 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 TMPRSS7Q7RTY8 843 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 LINC00470Q9BZP3 86 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
SHTN1-204ENST00000392903 ZNF442Q9H7R0 627 aa12.73□□□□□ -0.37
SHTN1-204ENST00000392903 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 GPM6AP51674 278 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 LCN2P80188 198 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 RTP5Q14D33 572 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 ZNF705AQ6ZN79 300 aaPredicted RBP12.72□□□□□ -0.37
SHTN1-204ENST00000392903 COLCA1Q6ZS62 124 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 MCEMP1Q8IX19 187 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 SPSB4Q96A44 273 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 RPUSD4Q96CM3 377 aaKnown RBP12.72□□□□□ -0.37
SHTN1-204ENST00000392903 GPHA2Q96T91 129 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 C20orf144Q9BQM9 153 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 KMT2EQ8IZD2 1858 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 SLC22A20A6NK97 555 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHTN1-204ENST00000392903 CLEC12BQ2HXU8 276 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 FER1L6-AS2Q96M78 137 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 PARD6GQ9BYG4 376 aaPredicted RBP12.72□□□□□ -0.37
SHTN1-204ENST00000392903 PARLQ9H300 379 aa12.72□□□□□ -0.37
SHTN1-204ENST00000392903 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 TUSC2O75896 110 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.37
SHTN1-204ENST00000392903 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 IRF2P14316 349 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 TRIP6Q15654 476 aaKnown RBP12.71□□□□□ -0.37
SHTN1-204ENST00000392903 NRN1LQ496H8 165 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 RNFT1Q5M7Z0 435 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 MRPL21Q7Z2W9 205 aaKnown RBP12.71□□□□□ -0.37
SHTN1-204ENST00000392903 MDS2Q8NDY4 140 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 LHX4Q969G2 390 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 MS4A10Q96PG2 267 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 LPAR2Q9HBW0 351 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 KLF13Q9Y2Y9 288 aaPredicted RBP12.71□□□□□ -0.37
SHTN1-204ENST00000392903 ARHGAP21Q5T5U3 1957 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
SHTN1-204ENST00000392903 A0A0G2JRQ6 117 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 BRS3P32247 399 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.38
SHTN1-204ENST00000392903 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.38
SHTN1-204ENST00000392903 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 MRPL30Q8TCC3 161 aaKnown RBP12.71□□□□□ -0.38
SHTN1-204ENST00000392903 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.38
SHTN1-204ENST00000392903 WFIKKN1Q96NZ8 548 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 MIEN1Q9BRT3 115 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 FGF23Q9GZV9 251 aaPredicted RBP12.71□□□□□ -0.38
SHTN1-204ENST00000392903 PLK3Q9H4B4 646 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 SLC39A9Q9NUM3 307 aa12.71□□□□□ -0.38
SHTN1-204ENST00000392903 MED12LQ86YW9 2145 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 PIGBOS1A0A0B4J2F0 54 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 HSPB6O14558 160 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 TNFSF12O43508 249 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 VENTXO95231 258 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 BCL3P20749 454 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 PSMB3P49720 205 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 RPL15P61313 204 aaKnown RBP12.7□□□□□ -0.38
SHTN1-204ENST00000392903 ARG2P78540 354 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 ARL16Q0P5N6 197 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 GPR146Q96CH1 333 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 TBX15Q96SF7 602 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 IL36RNQ9UBH0 155 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 TNFSF13O75888 250 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 CD46P15529 392 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 HBG1P69891 147 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 HBG2P69892 147 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 ESPL1Q14674 2120 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 DIRC2Q96SL1 478 aa12.7□□□□□ -0.38
SHTN1-204ENST00000392903 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
SHTN1-204ENST00000392903 ZNF705FA8MVS1 300 aaPredicted RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 YPEL1O60688 119 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 ZNF705DP0CH99 300 aaPredicted RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 ZNF705BP0CI00 300 aaPredicted RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 UBE2NP61088 152 aaKnown RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 PMP22Q01453 160 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 TMEM256Q8N2U0 113 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 BTF3L4Q96K17 158 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 YPEL2Q96QA6 119 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 ZNF552Q9H707 407 aaPredicted RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 SVILO95425 2214 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 LILRA1O75019 489 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 PGLYRP1O75594 196 aaPredicted RBP12.69□□□□□ -0.38
SHTN1-204ENST00000392903 GYPAP02724 150 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 F2RP25116 425 aa12.69□□□□□ -0.38
SHTN1-204ENST00000392903 IL3RAP26951 378 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms