RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FABP5Q01469 135 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 TPBGQ13641 420 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 RAB11BQ15907 218 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 DCUN1D4Q92564 292 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 WWC2-AS2Q96NR7 200 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 URM1Q9BTM9 101 aaKnown RBP12.85□□□□□ -0.35
PTPRK-208ENST00000392449 CCDC90BQ9GZT6 254 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 Q9N2K0 584 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 TPSG1Q9NRR2 321 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 ZMAT5Q9UDW3 170 aaKnown RBP12.85□□□□□ -0.35
PTPRK-208ENST00000392449 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 HSPA12AO43301 675 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 LY86O95711 162 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
PTPRK-208ENST00000392449 CALRP27797 417 aaKnown RBP12.84□□□□□ -0.35
PTPRK-208ENST00000392449 RUNX1Q01196 453 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 DCTN2Q13561 401 aaKnown RBP12.84□□□□□ -0.35
PTPRK-208ENST00000392449 PLAC9Q5JTB6 97 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 PECRQ9BY49 303 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 C12orf4Q9NQ89 552 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTPRK-208ENST00000392449 ZNF256Q9Y2P7 627 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-208ENST00000392449 WASHC3Q9Y3C0 194 aa12.84□□□□□ -0.35
PTPRK-208ENST00000392449 RGS10O43665 173 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 IGHV3-11P01762 117 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 CD3GP09693 182 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 ZBTB25P24278 435 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 ZNF383Q8NA42 475 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 DLX4Q92988 240 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-208ENST00000392449 MS4A10Q96PG2 267 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 ISYNA1Q9NPH2 558 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 FOXA2Q9Y261 457 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-208ENST00000392449 TPRKBQ9Y3C4 175 aa12.83□□□□□ -0.36
PTPRK-208ENST00000392449 IGHV4OR15-8A0A075B7B6 117 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 A0A087WW49 117 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 CPEP16870 476 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 CRIP2P52943 208 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-208ENST00000392449 PSG5Q15238 335 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 HES5Q5TA89 166 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 ZNF660Q6AZW8 331 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-208ENST00000392449 FAM3DQ96BQ1 224 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
PTPRK-208ENST00000392449 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 RIMS4Q9H426 269 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-208ENST00000392449 METTL1Q9UBP6 276 aaKnown RBP12.82□□□□□ -0.36
PTPRK-208ENST00000392449 HSF4Q9ULV5 492 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 NUBP2Q9Y5Y2 271 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 U3KQK5 164 aa12.82□□□□□ -0.36
PTPRK-208ENST00000392449 HUWE1Q7Z6Z7 4374 aaKnown RBP12.82□□□□□ -0.36
PTPRK-208ENST00000392449 ITGB1BP1O14713 200 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 OVOL1O14753 267 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 CA2P00918 260 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 CRHBPP24387 322 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 MC5RP33032 325 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 MLLT11Q13015 90 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-208ENST00000392449 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 MOGAT2Q3SYC2 334 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 PPP1R27Q86WC6 154 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 EDARADDQ8WWZ3 215 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 MAFIPQ8WZ33 124 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 KCNK7Q9Y2U2 307 aa12.81□□□□□ -0.36
PTPRK-208ENST00000392449 SORL1Q92673 2214 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 TMEM272A0A1B0GTI8 110 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 SHISA3A0PJX4 238 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 LDLRAD4O15165 306 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 SAP30O75446 220 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 ARL6IP5O75915 188 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
PTPRK-208ENST00000392449 OR10A3P58181 314 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 ACTBL2Q562R1 376 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 ARPC1AQ92747 370 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 MGLLQ99685 303 aa12.8□□□□□ -0.36
PTPRK-208ENST00000392449 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 LINC01619G3V211 115 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 M0R1X1 148 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 ARPC1BO15143 372 aaKnown RBP12.79□□□□□ -0.36
PTPRK-208ENST00000392449 DENRO43583 198 aaKnown RBP12.79□□□□□ -0.36
PTPRK-208ENST00000392449 SLC25A17O43808 307 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 RPS16P62249 146 aaKnown RBP12.79□□□□□ -0.36
PTPRK-208ENST00000392449 SSX1Q16384 188 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 GRPEL2Q8TAA5 225 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 PTX4Q96A99 478 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 ZNF221Q9UK13 617 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 V9GY05 133 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 STAB2Q8WWQ8 2551 aa12.79□□□□□ -0.36
PTPRK-208ENST00000392449 A0A0B4J203 849 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 BET1O15155 118 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 RBBP9O75884 186 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-208ENST00000392449 SPNP16150 400 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms