RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RND1Q92730 232 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 CRISPLD2Q9H0B8 497 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 A0A1B0GWB2 263 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 FGF5P12034 268 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 JOSD1Q15040 202 aaPredicted RBP13.99□□□□□ -0.17
SHANK1-204ENST00000391814 C3AR1Q16581 482 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 SSBP3Q9BWW4 388 aaPredicted RBP13.99□□□□□ -0.17
SHANK1-204ENST00000391814 CEACAM18A8MTB9 384 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 PIN1P1O15428 100 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 TMEM70Q9BUB7 260 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 HSPB7Q9UBY9 170 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 DTX4Q9Y2E6 619 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 LINC01387J3KSC0 135 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 NDUFS8O00217 210 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 WNT16Q9UBV4 365 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 SSTR5P35346 364 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 REG1BP48304 166 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 GFRA1P56159 465 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 HILPDAQ9Y5L2 63 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 PDE4DIPQ5VU43 2346 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 GPR3P46089 330 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 NUP37Q8NFH4 326 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 SGK494Q96LW2 274 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 FAM60AQ9NP50 221 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 TRBV5-7A0A0A0MS05 114 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 OR4D5Q8NGN0 318 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 A0A0U1RQV5 110 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 PGPA6NDG6 321 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 EML2O95834 649 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 SAPCD1Q5SSQ6 148 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 FOXC2Q99958 501 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 NDUFAF3Q9BU61 184 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 WNT5BQ9H1J7 359 aa13.98□□□□□ -0.17
SHANK1-204ENST00000391814 IGKV3D-11A0A0A0MRZ8 115 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 A0A1W2PPV9 198 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 NDUFS6O75380 124 aaKnown RBP13.97□□□□□ -0.17
SHANK1-204ENST00000391814 IGKV3-11P04433 115 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 IGHV4-34P06331 123 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 LGALS7P47929 136 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 SCN4AP35499 1836 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
SHANK1-204ENST00000391814 CXorf51AA0A1B0GTR3 108 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 HYPMO75409 117 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 TMEM160Q9NX00 188 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 UCN2Q96RP3 112 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 FAM206AQ9NX38 181 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 C1QTNF9BB2RNN3 333 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 SLC17A3O00476 420 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 ZNF708P17019 499 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 COX14Q96I36 57 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 MEGF9Q9H1U4 602 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 CLEC1BQ9P126 229 aa13.97□□□□□ -0.17
SHANK1-204ENST00000391814 ZNF784Q8NCA9 323 aaPredicted RBP13.96□□□□□ -0.17
SHANK1-204ENST00000391814 OR1L8Q8NGR8 309 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 TRAV14DV4A0A0A6YYC5 116 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 CGB1A6NKQ9 187 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 UPK3AO75631 287 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 GPR35Q9HC97 309 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 MSGN1A6NI15 193 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 GPR6P46095 362 aaPredicted RBP13.96□□□□□ -0.17
SHANK1-204ENST00000391814 FAM19A2Q8N3H0 131 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 TYMSP04818 313 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 TDHQ8IZJ6 230 aa13.96□□□□□ -0.17
SHANK1-204ENST00000391814 RBFOX2O43251 390 aaKnown RBP eCLIP13.96□□□□□ -0.18
SHANK1-204ENST00000391814 ZG16O60844 167 aa13.96□□□□□ -0.18
SHANK1-204ENST00000391814 ADMP35318 185 aa13.96□□□□□ -0.18
SHANK1-204ENST00000391814 SPSB4Q96A44 273 aa13.96□□□□□ -0.18
SHANK1-204ENST00000391814 ZPBPQ9BS86 351 aa13.96□□□□□ -0.18
SHANK1-204ENST00000391814 LAMTOR2Q9Y2Q5 125 aa13.96□□□□□ -0.18
SHANK1-204ENST00000391814 H3BUT2 72 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 SRP19P09132 144 aaKnown RBP13.95□□□□□ -0.18
SHANK1-204ENST00000391814 ASAH2BP0C7U1 165 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 TFPI2P48307 235 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 C2orf83Q53S99 150 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 NFAM1Q8NET5 270 aaPredicted RBP13.95□□□□□ -0.18
SHANK1-204ENST00000391814 OR4C13Q8NGP0 309 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 SRSF12Q8WXF0 261 aaKnown RBP13.95□□□□□ -0.18
SHANK1-204ENST00000391814 DMRTA2Q96SC8 542 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 TTC3P53804 2025 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 RAXQ9Y2V3 346 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 LINC00869P0C866 280 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 CENPWQ5EE01 88 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 ARFGEF1Q9Y6D6 1849 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 SPINK14Q6IE38 97 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 IGKV3OR2-268A0A0C4DH90 116 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 J3QT63 122 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 LINC01565O15544 149 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 KLK10O43240 276 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
SHANK1-204ENST00000391814 IGHV3OR16-12A0A075B7B8 117 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 A0A087WWC5 75 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 SRD5A2P31213 254 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 ZNF818PQ6ZRF7 136 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 TMEM52Q8NDY8 209 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 MAFAQ8NHW3 353 aaPredicted RBP13.94□□□□□ -0.18
SHANK1-204ENST00000391814 ANAPC13Q9BS18 74 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 MPDU1O75352 247 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 CTGFP29279 349 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms