RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 MALRD1Q5VYJ5 2156 aa1.31□□□□□ -2.2
RNU6-278P-201ENST00000390945 COL4A1P02462 1669 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 STRCQ7RTU9 1775 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 A0A0J9YX75 114 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 KNCNA6PVL3 124 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 F5H768 121 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 LY6LH3BQJ8 138 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 SLC17A3O00476 420 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 LINC00614P0C842 121 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 PET100P0DJ07 73 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 CD99P14209 185 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 CPMP14384 443 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 CXCL2P19875 107 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 CRHBPP24387 322 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 CRYBB3P26998 211 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 ATP6V0CP27449 155 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 CD79BP40259 229 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 PSMD8P48556 350 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 EMP2P54851 167 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 HERVK_113P63121 156 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 LGALS9CQ6DKI2 356 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 RASL11AQ6T310 242 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 TMEM156Q8N614 296 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 OR10A6Q8NH74 314 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 DNAJC30Q96LL9 226 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 C7orf50Q9BRJ6 194 aaKnown RBP1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 LLPHQ9BRT6 129 aaKnown RBP1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 MND1Q9BWT6 205 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 MROQ9BYG7 248 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 EIF5A2Q9GZV4 153 aaKnown RBP1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 HDHD2Q9H0R4 259 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 MS4A6AQ9H2W1 248 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 PLEKHJ1Q9NW61 149 aa1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU6-278P-201ENST00000390945 IGHV3-15A0A0B4J1V0 119 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 CETN3O15182 167 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 ZW10O43264 779 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 STK16O75716 305 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 CRTAPO75718 401 aaPredicted RBP1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 ATP6V1G2O95670 118 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 SLC25A16P16260 332 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 CXCL3P19876 107 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 RWDD2BP57060 319 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 CXCR4P61073 352 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 RPS24P62847 133 aaKnown RBP1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 MED21Q13503 144 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 EBPQ15125 230 aaKnown RBP1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 LGALS9BQ3B8N2 356 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 TMEM176BQ3YBM2 270 aaPredicted RBP1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 C2orf91Q6ZV80 131 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 ATP5L2Q7Z4Y8 100 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 OTUD6BQ8N6M0 293 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 RNASE6Q93091 150 aaKnown RBP1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 CPNE2Q96FN4 548 aaPredicted RBP1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 DHRS9Q9BPW9 319 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 Q9BRP9 147 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 CDCA4Q9BXL8 241 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 LRRC19Q9H756 370 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 PSMD13Q9UNM6 376 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 ALG5Q9Y673 324 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 MINOS1-NBL1R4GNA1 71 aa1.29□□□□□ -2.2
RNU6-278P-201ENST00000390945 TRIOBPQ9H2D6 2365 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 IGHV3-73A0A0B4J1V6 119 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 C1orf232A0A0U1RR37 186 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 TEX50A0A1B0GTY4 177 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 M0R381 172 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 MRASO14807 208 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 TRAPPC3O43617 180 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 IL6P05231 212 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 C8orf88P0DMB2 117 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 CD40LGP29965 261 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 LPAR6P43657 344 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 MAP3K7CLP57077 242 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 FABP5Q01469 135 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 TPRXLQ17RH7 258 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 FAM9CQ8IZT9 166 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 OR2D3Q8NGH3 330 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 OR4K13Q8NH42 304 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 CLDND2Q8NHS1 167 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 HAVCR2Q8TDQ0 301 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 C16orf78Q8WTQ4 265 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 Q8WTZ3 238 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 MS4A6EQ96DS6 147 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 DCUN1D5Q9BTE7 237 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 NSRP1Q9H0G5 558 aaKnown RBP1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 FAM206AQ9NX38 181 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 EMC3Q9P0I2 261 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 SNX12Q9UMY4 172 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 GREB1Q4ZG55 1949 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 CR1P17927 2039 aa1.28□□□□□ -2.2
RNU6-278P-201ENST00000390945 MAST2Q6P0Q8 1798 aa1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 ABCC12Q96J65 1359 aa1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 A0A1W2PQL4 384 aaPredicted RBP1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 VPS37CA5D8V6 355 aaPredicted RBP1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 OR5K4A6NMS3 321 aa1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 UBFD1O14562 309 aaKnown RBP1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 STX10O60499 249 aa1.27□□□□□ -2.21
RNU6-278P-201ENST00000390945 PSMG1O95456 288 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms