RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 RAB7AP51149 207 aa20.87■□□□□ 0.93
SHOX2-201ENST00000389589 NHLH2Q02577 135 aa20.87■□□□□ 0.93
SHOX2-201ENST00000389589 CD300LFQ8TDQ1 290 aa20.87■□□□□ 0.93
SHOX2-201ENST00000389589 CCL17Q92583 94 aa20.87■□□□□ 0.93
SHOX2-201ENST00000389589 BSCL2Q96G97 398 aaPredicted RBP20.87■□□□□ 0.93
SHOX2-201ENST00000389589 RAMP3O60896 148 aa20.86■□□□□ 0.93
SHOX2-201ENST00000389589 CLDN14O95500 239 aa20.86■□□□□ 0.93
SHOX2-201ENST00000389589 CLEC9AQ6UXN8 241 aa20.86■□□□□ 0.93
SHOX2-201ENST00000389589 GAB2Q9UQC2 676 aa20.86■□□□□ 0.93
SHOX2-201ENST00000389589 hADV38S2A0JD32 116 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 C17orf98A8MV24 154 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 PLAUP00749 431 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 FAM157CP0CG43 387 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 BAXQ07812 192 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 SWI5Q1ZZU3 235 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 TMEM252Q8N6L7 170 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 CACNA1AO00555 2505 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 IGSF23A1L1A6 192 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 FAM90A26D6RGX4 464 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 FGF2P09038 288 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 OMGP23515 440 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 RPL23AP62750 156 aaKnown RBP20.85■□□□□ 0.93
SHOX2-201ENST00000389589 CDSNQ15517 529 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 WFDC1Q9HC57 220 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 SLC25A10Q9UBX3 287 aaPredicted RBP20.85■□□□□ 0.93
SHOX2-201ENST00000389589 DIDO1Q9BTC0 2240 aaKnown RBP20.85■□□□□ 0.93
SHOX2-201ENST00000389589 PKDREJQ9NTG1 2253 aa20.85■□□□□ 0.93
SHOX2-201ENST00000389589 MEF2CQ06413 473 aaPredicted RBP20.84■□□□□ 0.93
SHOX2-201ENST00000389589 ZNF816Q0VGE8 651 aaPredicted RBP20.84■□□□□ 0.93
SHOX2-201ENST00000389589 IZUMO4Q1ZYL8 232 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 ZNF672Q499Z4 452 aaPredicted RBP20.84■□□□□ 0.93
SHOX2-201ENST00000389589 OR2B11Q5JQS5 317 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 TCF23Q7RTU1 214 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 SAT2Q96F10 170 aaPredicted RBP20.84■□□□□ 0.93
SHOX2-201ENST00000389589 IDI2-AS1Q9NZ38 188 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 LINC00312Q9Y6C7 94 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 HCFC1P51610 2035 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 LINC00473A8K010 186 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 SIAH2O43255 324 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 NXPH3O95157 252 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 NDUFB7P17568 137 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 DUTP33316 252 aaKnown RBP20.84■□□□□ 0.93
SHOX2-201ENST00000389589 BRWD1-AS2P59051 145 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 IFI27L2Q9H2X8 130 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 TAS2R3Q9NYW6 316 aa20.84■□□□□ 0.93
SHOX2-201ENST00000389589 A8MXK9 166 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 TOR1AO14656 332 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 SYNGR2O43760 224 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 TMEM50AO95807 157 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 P0C879 139 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 PAX9P55771 341 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 MUC15Q8N387 334 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 GINS3Q9BRX5 216 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 ABHD14AQ9BUJ0 271 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 LPAR3Q9UBY5 353 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 WSB1Q9Y6I7 421 aa20.83■□□□□ 0.93
SHOX2-201ENST00000389589 ANKHD1Q8IWZ3 2542 aaKnown RBP20.83■□□□□ 0.92
SHOX2-201ENST00000389589 IGHV1-69-2A0A0G2JMI3 117 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 S1PR2O95136 353 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 ZNF134P52741 427 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.82■□□□□ 0.92
SHOX2-201ENST00000389589 TMEM204Q9BSN7 226 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 TNFRSF13BO14836 293 aaPredicted RBP20.82■□□□□ 0.92
SHOX2-201ENST00000389589 KRASP01116 189 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 SULT1A2P50226 295 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 ZNF266Q14584 549 aa20.82■□□□□ 0.92
SHOX2-201ENST00000389589 COL6A6A6NMZ7 2263 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 ADGRG4Q8IZF6 3080 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 ZNF705EA8MWA4 302 aaPredicted RBP20.81■□□□□ 0.92
SHOX2-201ENST00000389589 SEC11BP0C7V7 166 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 G6PCP35575 357 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 OR10A7Q8NGE5 316 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 GAL3ST2Q9H3Q3 398 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 YLPM1P49750 1951 aaKnown RBP20.81■□□□□ 0.92
SHOX2-201ENST00000389589 RAB29O14966 203 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 PROP1O75360 226 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 FBXO24O75426 580 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 TFF3Q07654 80 aa20.81■□□□□ 0.92
SHOX2-201ENST00000389589 NUDT19A8MXV4 375 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 TEX46H3BTG2 121 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 M0R1X1 148 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 NDUFA2O43678 99 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 LOXP28300 417 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-201ENST00000389589 TAS2R30P59541 319 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 NCR3LG1Q68D85 454 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 STX12Q86Y82 276 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 OR1S2Q8NGQ3 325 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 SMIM8Q96KF7 97 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 KAAG1Q9UBP8 84 aa20.8■□□□□ 0.92
SHOX2-201ENST00000389589 RBFOX2O43251 390 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHOX2-201ENST00000389589 NDUFB3O43676 98 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 KIR2DS2P43631 304 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 HFEQ30201 348 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 LRRC10Q5BKY1 277 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 CT45A1Q5HYN5 189 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 CT45A3Q8NHU0 189 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 MARC2Q969Z3 335 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-201ENST00000389589 PRELID3BQ9Y3B1 194 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 NBASA2RRP1 2371 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms