RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PERPQ96FX8 193 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 LOC105371242A0A075B767 164 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 WNT5AP41221 380 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF561Q8N587 486 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 TMEM222Q9H0R3 208 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 C5orf66Q9H5L9 145 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 MAP1LC3B2A6NCE7 125 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 GNG7O60262 68 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 LYZP61626 148 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF524Q96C55 264 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 MAP1LC3BQ9GZQ8 125 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 C5orf63A6NC05 138 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 TMEM65Q6PI78 240 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 BTNL8Q6UX41 500 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 POC1AQ8NBT0 407 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 HTR1DP28221 377 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 ARL16Q0P5N6 197 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 LRP11Q86VZ4 500 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 FGFRL1Q8N441 504 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 OR10G4Q8NGN3 311 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 OR10G9Q8NGN4 311 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 OR10G7Q8NGN6 311 aa11.12□□□□□ -0.63
PTPRN2-202ENST00000389416 PIEZO2Q9H5I5 2752 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF320A2RRD8 509 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 DVL1O14640 695 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 IGHG3P01860 377 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 TFF1P04155 84 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 DVL1P1P54792 670 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 FGF8P55075 233 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ATP6V1FQ16864 119 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 CXorf66Q5JRM2 361 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF645Q8N7E2 425 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 SDHCQ99643 169 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 H0Y980 276 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 LIPFP07098 398 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 PDLIM4P50479 330 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ANKRD55Q3KP44 614 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 SPNS3Q6ZMD2 512 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 PNKDQ8N490 385 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 PROK2Q9HC23 129 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 S100A12P80511 92 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF729A6NN14 1252 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 SLC25A17O43808 307 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 MMP7P09237 267 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 HOXD11P31277 338 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 AKR1C3P42330 323 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 CDC34P49427 236 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 GUK1Q16774 197 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 SLC35E4Q6ICL7 350 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF818PQ6ZRF7 136 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 OR10Z1Q8NGY1 313 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 TM2D1Q9BX74 207 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 JPT1Q9UK76 154 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 GAB2Q9UQC2 676 aa11.11□□□□□ -0.63
PTPRN2-202ENST00000389416 A0A0G2JNJ9 132 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 GNLYP22749 145 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 MC5RP33032 325 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 SULT1A1P50225 295 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 NHLH2Q02577 135 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 OR9G1Q8NH87 305 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 Q9UFV3 132 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 CSPG4Q6UVK1 2322 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 DRAM1Q8N682 238 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 OR13A1Q8NGR1 328 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 DPF1Q92782 380 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 WFIKKN1Q96NZ8 548 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 PFDN5Q99471 154 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 C1QTNF9BB2RNN3 333 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 C1QTNF9P0C862 333 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 RPL27AP46776 148 aaKnown RBP11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 OR51I2Q9H344 312 aa11.1□□□□□ -0.63
PTPRN2-202ENST00000389416 GOSR1O95249 250 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 BPIFCQ8NFQ6 507 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 ATP5SQ99766 215 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 SH2D2AQ9NP31 389 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 CD74P04233 296 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 CCL1P22362 96 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms