RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 FGF5P12034 268 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 CCL11P51671 97 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 SPCS3P61009 180 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 Q56UQ5 140 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 TRAT1Q6PIZ9 186 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 C1QL4Q86Z23 238 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 TMEM178AQ8NBL3 297 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 MISP3Q96FF7 219 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 FER1L6-AS2Q96M78 137 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 PCED1AQ9H1Q7 454 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
TRAPPC9-201ENST00000389328 CEBPDP49716 269 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 RTL8BQ17RB0 113 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 OR4D5Q8NGN0 318 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 PSMG3Q9BT73 122 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 MRPL18Q9H0U6 180 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 EPOPA6NHQ4 379 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 TMEM250H0YL14 139 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CXorf1O96002 111 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CLPSP04118 112 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 BRS3P32247 399 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 HINT1P49773 126 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CT45A1Q5HYN5 189 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 HES3Q5TGS1 186 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 OR1L1Q8NH94 360 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CT45A3Q8NHU0 189 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CLEC1BQ9P126 229 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 SH3BGRL2Q9UJC5 107 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 NBASA2RRP1 2371 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 OR2H2O95918 312 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 LYL1P12980 280 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 CCL1P22362 96 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 FNDC1Q4ZHG4 1894 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 C10orf91Q5T1B1 145 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 TMEM171Q8WVE6 324 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 OR2J1Q9GZK6 312 aa11.24□□□□□ -0.61
TRAPPC9-201ENST00000389328 MAGEA5P43359 124 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 LRRC29Q8WV35 223 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 OOEPA6NGQ2 149 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 RPL23P62829 140 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 KCNMB1Q16558 191 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 AARDQ4LEZ3 155 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A10PA6NDY2 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A18PA6NE21 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A16PA6NEW6 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A20PA6NIJ5 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A8PA6NJQ4 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A7PA6NKC0 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A12PA8MX19 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A5PA8MXJ8 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A23PA8MXZ1 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 DNPH1O43598 174 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 IGHV2-70P01814 119 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 AMBPP02760 352 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A15PP0C7V4 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A13PP0C7W8 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A14PP0C7W9 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 FAM90A24PP0C7X0 464 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 HIST3H3Q16695 136 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 LRRC75BQ2VPJ9 315 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 TMEM54Q969K7 222 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 TMEM56Q96MV1 263 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 TMEM56-RWDD3S4R434 201 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 IGKV1-12A0A0C4DH73 117 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 hCG_38984A0A1B0GV85 526 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 WIPF3A6NGB9 483 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 PRR19A6NJB7 356 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 SPRY3O43610 288 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 IGKV1D-12P01611 117 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 ZNF525Q8N782 197 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 BLNKQ8WV28 456 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 KLF2Q9Y5W3 355 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-201ENST00000389328 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 DIDO1Q9BTC0 2240 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 ZIC3O60481 467 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 SUB1P53999 127 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 ID3Q02535 119 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 RNPS1Q15287 305 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 SPATA45Q537H7 98 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 SYNGR3O43761 229 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 S1PR2O95136 353 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms