RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 NDUFAF3Q9BU61 184 aa-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 MRPL20Q9BYC9 149 aaKnown RBP-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 MRM3Q9HC36 420 aaKnown RBP-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 BFARQ9NZS9 450 aa-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 OR52A1Q9UKL2 312 aa-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 COPS3Q9UNS2 423 aa-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 FAM169AQ9Y6X4 670 aa-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 WNK3Q9BYP7 1800 aa-3.65□□□□□ -2.99
RNU6-1340P-201ENST00000384438 CDHR2Q9BYE9 1310 aa-3.66□□□□□ -2.99
RNU6-1340P-201ENST00000384438 CENPFP49454 3210 aa-3.66□□□□□ -2.99
RNU6-1340P-201ENST00000384438 TRAV8-4A0A0B4J246 113 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 TRBV10-3A0A0K0K1G6 114 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 XKRY2A2RUG3 117 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 P01737 135 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 HTR1AP08908 422 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 BAALC-AS2P0C853 105 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 SLC2A5P22732 501 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 HSPA13P48723 471 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 CASP4P49662 377 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 CLDN8P56748 225 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 CCZ1BP86790 482 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 CCZ1P86791 482 aaPredicted RBP-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 OR5I1Q13606 314 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 OR4D1Q15615 310 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 SSX1Q16384 188 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 MEP1BQ16820 701 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 HYAL4Q2M3T9 481 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 CLLU1OSQ5K130 101 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 SPANXN5Q5MJ07 72 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 C1QTNF12Q5T7M4 302 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 ARMC12Q5T9G4 340 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 Q5VV11 94 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 FAM180BQ6P0A1 224 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 TTC23LQ6PF05 361 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 Q6ZQT0 140 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 RBM43Q6ZSC3 357 aaKnown RBP-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 BZW1Q7L1Q6 419 aaKnown RBP-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 SSX7Q7RTT5 188 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 NECAB1Q8N987 351 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 COPS8Q99627 209 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 NIPSNAP3BQ9BS92 247 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 TSPYL1Q9H0U9 437 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 SH2D4AQ9H788 454 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 TMEM9BQ9NQ34 198 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 TUBG2Q9NRH3 451 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 CLN6Q9NWW5 311 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 KDM3BQ7LBC6 1761 aa-3.66□□□□□ -3
RNU6-1340P-201ENST00000384438 GAPVD1Q14C86 1478 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 KDM6AO15550 1401 aaPredicted RBP-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 TRBV20OR9-2A0A075B6H5 130 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 LOC100509620A0A075B734 347 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 H3BTX0 84 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 AP3B1O00203 1094 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 TXNDC9O14530 226 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 CREBL2O60519 120 aaPredicted RBP-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 OR2A4O95047 310 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 IFNGP01579 166 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 RPS3P23396 243 aaKnown RBP eCLIP-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 U2AF2P26368 475 aaKnown RBP eCLIP-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 MAP3K8P41279 467 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 ACTG2P63267 376 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 EMX2Q04743 252 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 LRRC74AQ0VAA2 488 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 ADIGQ0VDE8 80 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 IMPG1Q17R60 797 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 NPSR1Q6W5P4 371 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 TEN1Q86WV5 123 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 EFCAB13Q8IY85 973 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 FAM133AQ8N9E0 248 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 STKLD1Q8NE28 680 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 OR52E2Q8NGJ4 325 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 PTP4A1Q93096 173 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 TMEM45BQ96B21 275 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 GALMQ96C23 342 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 OPTNQ96CV9 577 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 REEP6Q96HR9 211 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 JSRP1Q96MG2 331 aaPredicted RBP-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 OR2A7Q96R45 310 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 RNF2Q99496 336 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 ACPTQ9BZG2 426 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 HEBP1Q9NRV9 189 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 GRHPRQ9UBQ7 328 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 PPIEQ9UNP9 301 aaKnown RBP-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 LRP6O75581 1613 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 KIF13AQ9H1H9 1805 aa-3.67□□□□□ -3
RNU6-1340P-201ENST00000384438 ZNF608Q9ULD9 1512 aaPredicted RBP-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 A0A087WV62 115 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 OXSR1O95747 527 aaPredicted RBP-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 CLTBP09497 229 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 OR5AL1P0C617 328 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 IQCF3P0C7M6 154 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 GGT1P19440 569 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 CPN2P22792 545 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 CXCR1P25024 350 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 PBLDP30039 288 aaPredicted RBP-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 FDFT1P37268 417 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 AP2S1P53680 142 aaPredicted RBP-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 CDH6P55285 790 aa-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 GEMIN4P57678 1058 aaKnown RBP-3.68□□□□□ -3
RNU6-1340P-201ENST00000384438 BPIFB3P59826 476 aa-3.68□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms