RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SRP14P37108 136 aaKnown RBP7.57□□□□□ -1.2
GPNMB-202ENST00000381990 IDH3GP51553 393 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-202ENST00000381990 LCN2P80188 198 aa7.57□□□□□ -1.2
GPNMB-202ENST00000381990 ACTL10Q5JWF8 245 aa7.57□□□□□ -1.2
GPNMB-202ENST00000381990 ASCL5Q7RTU5 278 aa7.57□□□□□ -1.2
GPNMB-202ENST00000381990 ZNF525Q8N782 197 aa7.57□□□□□ -1.2
GPNMB-202ENST00000381990 COL25A1Q9BXS0 654 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-202ENST00000381990 DCAF16Q9NXF7 216 aa7.57□□□□□ -1.2
GPNMB-202ENST00000381990 PTPRZ1P23471 2315 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-202ENST00000381990 IGKV1D-13A0A0B4J2D9 117 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 ZNF503-AS2A6NEH8 195 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 VENTXO95231 258 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 SCTP09683 121 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 IGKV1-13P0DP09 117 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 PSMB3P49720 205 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 FGF12P61328 243 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 PAX5Q02548 391 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 PLP2Q04941 152 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 TNFRSF9Q07011 255 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 TMEM267Q0VDI3 215 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 HERPUD1Q15011 391 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 CALHM1Q8IU99 346 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 ZADH2Q8N4Q0 377 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 OR1K1Q8NGR3 316 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 PIGCQ92535 297 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 WDR61Q9GZS3 305 aaKnown RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 OR51I2Q9H344 312 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 CCL28Q9NRJ3 127 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 C5orf49A4QMS7 147 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 H3BP45 60 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 M0R143 59 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 GGCTO75223 188 aaKnown RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 SNRPCP09234 159 aaKnown RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 ERVFC1-1P60608 527 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 KCNIP4Q6PIL6 250 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 LINC00596Q86U02 117 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 BCL2L2Q92843 193 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 LHX4Q969G2 390 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 APOBEC3DQ96AK3 386 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-202ENST00000381990 SARAFQ96BY9 339 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 GPR146Q96CH1 333 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 R3HDM4Q96D70 268 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 SLC39A9Q9NUM3 307 aa7.56□□□□□ -1.2
GPNMB-202ENST00000381990 TRBV6-6A0A0A6YYG2 114 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 M0QZK8 103 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 MBP02144 154 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 CCNOP22674 350 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 PRSS12P56730 875 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 PDCD1Q15116 288 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 IGFL3Q6UXB1 125 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 OR2T10Q8NGZ9 312 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
GPNMB-202ENST00000381990 POM121L2Q96KW2 1035 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 REPIN1Q9BWE0 567 aaKnown RBP7.55□□□□□ -1.2
GPNMB-202ENST00000381990 PLK3Q9H4B4 646 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 VSIRQ9H7M9 311 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 PSENENQ9NZ42 101 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 OR2W1Q9Y3N9 320 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 FAM90A26D6RGX4 464 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 NXPH3O95157 252 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 CD55P08174 381 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 P2RY6Q15077 328 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 SSX7Q7RTT5 188 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
GPNMB-202ENST00000381990 TAF15Q92804 592 aaKnown RBP eCLIP7.55□□□□□ -1.2
GPNMB-202ENST00000381990 TRIB1Q96RU8 372 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 IMMP2LQ96T52 175 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 OR6C3Q9NZP0 311 aa7.55□□□□□ -1.2
GPNMB-202ENST00000381990 CD300LBA8K4G0 201 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 KLK10O43240 276 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 CRYABP02511 175 aaKnown RBP7.54□□□□□ -1.2
GPNMB-202ENST00000381990 CD99P14209 185 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 TUBG1P23258 451 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 APLNRP35414 380 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 RELQ04864 619 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-202ENST00000381990 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 FAM214BQ7L5A3 538 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 GBGT1Q8N5D6 347 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 OR10J5Q8NHC4 309 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 MRPL30Q8TCC3 161 aaKnown RBP7.54□□□□□ -1.2
GPNMB-202ENST00000381990 CACNA1GO43497 2377 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 IGKV1-6A0A0C4DH72 117 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 A0A0G2JRQ6 117 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 TMEM210A6NLX4 147 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 NPIPB11E5RHQ5 1161 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 SLC33A1O00400 549 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-202ENST00000381990 EREGO14944 169 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 WISP2O76076 250 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 CCL2P13500 99 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 GZMHP20718 246 aa7.54□□□□□ -1.2
GPNMB-202ENST00000381990 MDKP21741 143 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-202ENST00000381990 CNN1P51911 297 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms