RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 DLX1P56177 255 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 SUPT4H1P63272 117 aaKnown RBP16.65■□□□□ 0.26
TSSC4-203ENST00000380996 HLA-DRB5Q30154 266 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 ODF3L1Q8IXM7 274 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 OR52B4Q8NGK2 314 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 AUP1Q9Y679 476 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 MED13LQ71F56 2210 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 M0R1X1 148 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 IGHV4-31P0DP07 118 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 RPL39P5Q59GN2 51 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 FAM71F2Q6NXP2 309 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 OR51H1Q8NH63 302 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 CASTOR1Q8WTX7 329 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 MSI2Q96DH6 328 aaKnown RBP16.65■□□□□ 0.26
TSSC4-203ENST00000380996 TBX15Q96SF7 602 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 PHB2Q99623 299 aa16.65■□□□□ 0.26
TSSC4-203ENST00000380996 LIN7CQ9NUP9 197 aaKnown RBP16.65■□□□□ 0.26
TSSC4-203ENST00000380996 ARHGAP32A7KAX9 2087 aa16.64■□□□□ 0.26
TSSC4-203ENST00000380996 ITPR2Q14571 2701 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 SSNA1O43805 119 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 TGFAP01135 160 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 ARG1P05089 322 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 HOXB4P17483 251 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-203ENST00000380996 ZNF137PP52743 207 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 PRB3Q04118 309 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-203ENST00000380996 EIF4EBP1Q13541 118 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-203ENST00000380996 SLC9A3R2Q15599 337 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 COQ8AQ8NI60 647 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 MITD1Q8WV92 249 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 C5orf30Q96GV9 206 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 ADTRPQ96IZ2 230 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 ZNRD1Q9P1U0 126 aa16.64■□□□□ 0.25
TSSC4-203ENST00000380996 PDZD2O15018 2839 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 H0Y980 276 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 BUB1B-PAK6H3BSN5 160 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 J3QLI3 93 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 OR5AC1P0C628 307 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 ZNF16P17020 682 aaPredicted RBP16.63■□□□□ 0.25
TSSC4-203ENST00000380996 UBE2E1P51965 193 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 KLRD1Q13241 179 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 CYB5R2Q6BCY4 276 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 HCP5Q6MZN7 132 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 ZNF833PQ6ZTB9 187 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 C12orf45Q8N5I9 185 aaPredicted RBP16.63■□□□□ 0.25
TSSC4-203ENST00000380996 TCTEX1D1Q8N7M0 179 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 GPHA2Q96T91 129 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 ZNF251Q9BRH9 671 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 MED28Q9H204 178 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 C7orf69Q9H7B7 122 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 ITGB1BP2Q9UKP3 347 aa16.63■□□□□ 0.25
TSSC4-203ENST00000380996 A0A0B4J2A0 478 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 ODF3BA8MYP8 253 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 RNASEK-C17orf49H0YIS7 233 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 PROP1O75360 226 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 HTR1DP28221 377 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 DUTP33316 252 aaKnown RBP16.62■□□□□ 0.25
TSSC4-203ENST00000380996 SRPXP78539 464 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 CADM3Q8N126 398 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 OR4P4Q8NGL7 312 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 TCTEX1D2Q8WW35 142 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 LHX4Q969G2 390 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 SHPKQ9UHJ6 478 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 PRELID3BQ9Y3B1 194 aa16.62■□□□□ 0.25
TSSC4-203ENST00000380996 PRRC2AP48634 2157 aaKnown RBP16.62■□□□□ 0.25
TSSC4-203ENST00000380996 PIGBOS1A0A0B4J2F0 54 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 SERPINE2P07093 398 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 CEACAM3P40198 252 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 THBS3P49746 956 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 BCAP31P51572 246 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 LGALS4P56470 323 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 SP6Q3SY56 376 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 UXS1Q8NBZ7 420 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 ST6GALNAC6Q969X2 333 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 TP53RKQ96S44 253 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 TMEM222Q9H0R3 208 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 MAST4O15021 2626 aa16.61■□□□□ 0.25
TSSC4-203ENST00000380996 LEUTXA8MZ59 168 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 RRAS2P62070 204 aaPredicted RBP16.6■□□□□ 0.25
TSSC4-203ENST00000380996 TMEM187Q14656 261 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 MINOS1Q5TGZ0 78 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 TGIF2LXQ8IUE1 241 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 LGI3Q8N145 548 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 CD300LFQ8TDQ1 290 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 GLYATL2Q8WU03 294 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 FAM212BQ9NTI7 297 aaPredicted RBP16.6■□□□□ 0.25
TSSC4-203ENST00000380996 DPM3Q9P2X0 92 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 MINOS1-NBL1R4GNA1 71 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 NOTCH2Q04721 2471 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 TXNL1O43396 289 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 GAPDHP04406 335 aaKnown RBP16.6■□□□□ 0.25
TSSC4-203ENST00000380996 EPHA1P21709 976 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 UCP1P25874 307 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 KIR2DS2P43631 304 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 RPL30P62888 115 aaKnown RBP16.6■□□□□ 0.25
TSSC4-203ENST00000380996 TAGLNQ01995 201 aaKnown RBP16.6■□□□□ 0.25
TSSC4-203ENST00000380996 ANKRD55Q3KP44 614 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 LIAT1Q6ZQX7 453 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 C1orf229Q6ZS94 237 aaPredicted RBP16.6■□□□□ 0.25
TSSC4-203ENST00000380996 PDZD9Q8IXQ8 264 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 DRAXINQ8NBI3 349 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms