RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 UNC13CQ8NB66 2214 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 Q6ZNB5 142 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 NDUFA3O95167 84 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 TYMSP04818 313 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 SRSF7Q16629 238 aaKnown RBP eCLIP10.77□□□□□ -0.68
CHD3-203ENST00000380358 IBA57Q5T440 356 aaKnown RBP10.77□□□□□ -0.68
CHD3-203ENST00000380358 ST6GAL2Q96JF0 529 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 BCL2L10Q9HD36 194 aa10.77□□□□□ -0.68
CHD3-203ENST00000380358 LAMB4A4D0S4 1761 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 TRBV20OR9-2A0A075B6H5 130 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 UPK3AO75631 287 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 UCP2P55851 309 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 MESTQ5EB52 335 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 ABHD12Q8N2K0 398 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 CA10Q9NS85 328 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 CALYQ9NYX4 217 aa10.77□□□□□ -0.69
CHD3-203ENST00000380358 LEUTXA8MZ59 168 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 SOD3P08294 240 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 NPPCP23582 126 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 TDGF1P3P51864 188 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 STHQ8IWL8 128 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 TCRBV5S2A0A599 114 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 CDC42EP2O14613 210 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 GP1BAP07359 652 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 CTGFP29279 349 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 CDC20Q12834 499 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 C10orf128Q5T292 105 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 MIC13Q5XKP0 118 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 CHRNA10Q9GZZ6 450 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 PARLQ9H300 379 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 H3BQ15 152 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 PGA4P0DJD7 388 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 PGA5P0DJD9 388 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 UBR2Q8IWV8 1755 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 RFLNBQ8N5W9 214 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 YIPF6Q96EC8 236 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 TBX21Q9UL17 535 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 TAF1P21675 1872 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 IGLV3-27P01718 113 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 NPBWR2P48146 333 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 SCNM1Q9BWG6 230 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 PRDM6Q9NQX0 595 aa10.76□□□□□ -0.69
CHD3-203ENST00000380358 MRM2Q9UI43 246 aaKnown RBP10.76□□□□□ -0.69
CHD3-203ENST00000380358 COL16A1Q07092 1604 aaPredicted RBP10.76□□□□□ -0.69
CHD3-203ENST00000380358 LIPT2A6NK58 231 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 APOMO95445 188 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 GOLT1AQ6ZVE7 132 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 EDA2RQ9HAV5 297 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 SLC25A1P53007 311 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 PCSK4Q6UW60 755 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 MBD3L1Q8WWY6 194 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 NKX2-2O95096 273 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 CRPP02741 224 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 SCTP09683 121 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 ZP3P21754 424 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 NUTF2P61970 127 aaKnown RBP10.75□□□□□ -0.69
CHD3-203ENST00000380358 STPG3Q8N7X2 389 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
CHD3-203ENST00000380358 PHLDA1Q8WV24 401 aaPredicted RBP10.75□□□□□ -0.69
CHD3-203ENST00000380358 KIR2DL4Q99706 377 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 EEF1AKMT3Q96AZ1 226 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 TMEM70Q9BUB7 260 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 RAB9AP51151 201 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 ZP4Q12836 540 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 INO80CQ6PI98 192 aaPredicted RBP10.75□□□□□ -0.69
CHD3-203ENST00000380358 SHISA5Q8N114 240 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 SSBP3Q9BWW4 388 aaPredicted RBP10.75□□□□□ -0.69
CHD3-203ENST00000380358 RGPD5Q99666 1765 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 CD24P25063 80 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 TMEM136Q6ZRR5 245 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 RNF133Q8WVZ7 376 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 GALNT14Q96FL9 552 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 MRPL16Q9NX20 251 aaKnown RBP10.75□□□□□ -0.69
CHD3-203ENST00000380358 HEATR5BQ9P2D3 2071 aa10.75□□□□□ -0.69
CHD3-203ENST00000380358 CLEC19AQ6UXS0 136 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 ASCL4Q6XD76 172 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 JKAMPQ9P055 326 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 MTFP1Q9UDX5 166 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 C21orf140B9A014 251 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 CDKN1AP38936 164 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 JOSD1Q15040 202 aaPredicted RBP10.74□□□□□ -0.69
CHD3-203ENST00000380358 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
CHD3-203ENST00000380358 C2orf88Q9BSF0 95 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 IL19Q9UHD0 177 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 SCN8AQ9UQD0 1980 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 ACSF3Q4G176 576 aaPredicted RBP10.74□□□□□ -0.69
CHD3-203ENST00000380358 FAM71F2Q6NXP2 309 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 RNF115Q9Y4L5 304 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 P2RY1P47900 373 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 ST6GALNAC6Q969X2 333 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 LOC390937A0A1W2PQ73 354 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 MOSPD3O75425 235 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 S1PR2O95136 353 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 CNTFRP26992 372 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 UCNP55089 124 aa10.74□□□□□ -0.69
CHD3-203ENST00000380358 J3QT63 122 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms