RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 TMEM30BQ3MIR4 351 aa12.71□□□□□ -0.37
RAB3IP-204ENST00000378815 MAGT1Q9H0U3 335 aa12.71□□□□□ -0.37
RAB3IP-204ENST00000378815 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.37
RAB3IP-204ENST00000378815 CACNG5Q9UF02 275 aa12.71□□□□□ -0.37
RAB3IP-204ENST00000378815 ZG16O60844 167 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 GAPDHP04406 335 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 MMP9P14780 707 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 AGAP20933 346 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 PPOXP50336 477 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 RPL7L1Q6DKI1 246 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 LYPD2Q6UXB3 125 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 COMMD7Q86VX2 200 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 PDZD9Q8IXQ8 264 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 SPAG16Q8N0X2 631 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 ITLN2Q8WWU7 325 aaPredicted RBP12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 CXorf58Q96LI9 332 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 C19orf12Q9NSK7 152 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 MED9Q9NWA0 146 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 IDI2-AS1Q9NZ38 188 aa12.71□□□□□ -0.38
RAB3IP-204ENST00000378815 TANC2Q9HCD6 1990 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 SLC31A2O15432 143 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 HFEQ30201 348 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 OR2B11Q5JQS5 317 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 OR2C3Q8N628 320 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 BSCL2Q96G97 398 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 ABHD14AQ9BUJ0 271 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 TAS2R3Q9NYW6 316 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 GAB2Q9UQC2 676 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 MMP24Q9Y5R2 645 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 TMEM50AO95807 157 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 IGHV3-7P01780 117 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 P0C879 139 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 RAB7AP51149 207 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 LINC00205P59089 165 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 RPL31P62899 125 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 EIF5AP63241 154 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 LYRM2Q9NU23 88 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 CTSZQ9UBR2 303 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 HCFC1P51610 2035 aa12.7□□□□□ -0.38
RAB3IP-204ENST00000378815 JTBO76095 146 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 NXPH3O95157 252 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 ZNF816Q0VGE8 651 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 ZNF273Q14593 569 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 CLEC9AQ6UXN8 241 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 ZNF439Q8NDP4 499 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 LEAP2Q969E1 77 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 COA4Q9NYJ1 87 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 NDUFB3O43676 98 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 NDUFA2O43678 99 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 CHST1O43916 411 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 MMP23AO75900 390 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 S1PR2O95136 353 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 VAMP2P63027 116 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 EWSR1Q01844 656 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 NHLH2Q02577 135 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 NCR3LG1Q68D85 454 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 SMIM3Q9BZL3 60 aa12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 RPUSD1Q9UJJ7 312 aaKnown RBP12.69□□□□□ -0.38
RAB3IP-204ENST00000378815 IGSF23A1L1A6 192 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 FAM24AA6NFZ4 105 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 B8ZZF3 427 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 WRBO00258 174 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 ATG12O94817 140 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 FSTL3O95633 263 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 CAV2P51636 162 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 PAX9P55771 341 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 RPL39P5Q59GN2 51 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 PRAMEF5Q5TYX0 476 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 OR10A7Q8NGE5 316 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 CD300LFQ8TDQ1 290 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 TMED6Q8WW62 240 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 WFDC1Q9HC57 220 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 HIVEP3Q5T1R4 2406 aa12.68□□□□□ -0.38
RAB3IP-204ENST00000378815 M0R1X1 148 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 DVL1O14640 695 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 KRASP01116 189 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 COL8A2P25067 703 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 NFYBP25208 207 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 G6PCP35575 357 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 TMEM252Q8N6L7 170 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 UBAC2Q8NBM4 344 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 GAL3ST2Q9H3Q3 398 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 CBLN4Q9NTU7 201 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 LPAR3Q9UBY5 353 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 C11orf71Q6IPW1 123 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 C1orf229Q6ZS94 237 aaPredicted RBP12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 ODF3L1Q8IXM7 274 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 RAB40CQ96S21 281 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 REG4Q9BYZ8 158 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 SLC25A31Q9H0C2 315 aa12.67□□□□□ -0.38
RAB3IP-204ENST00000378815 ARV1Q9H2C2 271 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms