RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TAF15Q92804 592 aaKnown RBP eCLIP14.99□□□□□ -0.01
SSU72-203ENST00000378725 OR2D2Q9H210 308 aa14.99□□□□□ -0.01
SSU72-203ENST00000378725 KLK11Q9UBX7 282 aa14.99□□□□□ -0.01
SSU72-203ENST00000378725 TSPAN9O75954 239 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 IGKV1D-33P01593 117 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 IGKV1-33P01594 117 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 PMP2P02689 132 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 HLA-DMAP28067 261 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 FCGR2CP31995 323 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 S100A5P33763 92 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 RFX2P48378 723 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 COMPP49747 757 aaPredicted RBP14.98□□□□□ -0.01
SSU72-203ENST00000378725 LUMP51884 338 aaPredicted RBP14.98□□□□□ -0.01
SSU72-203ENST00000378725 ACTG1P63261 375 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 DYRK1AQ13627 763 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 ZNF660Q6AZW8 331 aaPredicted RBP14.98□□□□□ -0.01
SSU72-203ENST00000378725 CCDC190Q86UF4 302 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 Q8N6K4 173 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 EAF1Q96JC9 268 aaPredicted RBP14.98□□□□□ -0.01
SSU72-203ENST00000378725 SDHAF2Q9NX18 166 aa14.98□□□□□ -0.01
SSU72-203ENST00000378725 RBM7Q9Y580 266 aaKnown RBP14.98□□□□□ -0.01
SSU72-203ENST00000378725 IGKV1D-13A0A0B4J2D9 117 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 IGKV1-13P0DP09 117 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 AADACP22760 399 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 ACTBP60709 375 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 DGCR2P98153 550 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 SSBP1Q04837 148 aaKnown RBP14.97□□□□□ -0.01
SSU72-203ENST00000378725 Q6ZSV7 163 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 OR5AN1Q8NGI8 311 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 OR6Q1Q8NGQ2 317 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 OR5H2Q8NGV7 314 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 OR2T10Q8NGZ9 312 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 SMIM4Q8WVI0 70 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 C5orf30Q96GV9 206 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 SLC25A33Q9BSK2 321 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 C16orf95Q9H693 158 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 BATF3Q9NR55 127 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 EHFQ9NZC4 300 aa14.97□□□□□ -0.01
SSU72-203ENST00000378725 ZNF107Q9UII5 783 aaPredicted RBP14.97□□□□□ -0.01
SSU72-203ENST00000378725 GSTZ1O43708 216 aaPredicted RBP14.96□□□□□ -0.01
SSU72-203ENST00000378725 SLC22A5O76082 557 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 MOSP00540 346 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 IGLV2-14P01704 120 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 TMEM11P17152 192 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 MC5RP33032 325 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 HRH1P35367 487 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 FOXL1Q12952 345 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 HES1Q14469 280 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 RNASE12Q5GAN4 147 aaKnown RBP14.96□□□□□ -0.01
SSU72-203ENST00000378725 ZNF645Q8N7E2 425 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 AKR1E2Q96JD6 320 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 NPFFR1Q9GZQ6 430 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 RANBP3Q9H6Z4 567 aaPredicted RBP14.96□□□□□ -0.01
SSU72-203ENST00000378725 RBMX2Q9Y388 322 aaKnown RBP14.96□□□□□ -0.01
SSU72-203ENST00000378725 MMP24Q9Y5R2 645 aa14.96□□□□□ -0.01
SSU72-203ENST00000378725 ATRQ13535 2644 aa14.96□□□□□ -0.02
SSU72-203ENST00000378725 OR5H14A6NHG9 310 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 H0YJW9 148 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 J3QRK9 145 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 M0R1X1 148 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 PPYP01298 95 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 PTBP1P26599 531 aaKnown RBP eCLIP14.95□□□□□ -0.02
SSU72-203ENST00000378725 ETV6P41212 452 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 RAG2P55895 527 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 HNF4GQ14541 408 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 ACTBL2Q562R1 376 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 VAX1Q5SQQ9 334 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 FAM131AQ6UXB0 335 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 Q8N2B8 174 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 ZNF383Q8NA42 475 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 TMEM229BQ8NBD8 167 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 DRAXINQ8NBI3 349 aaPredicted RBP14.95□□□□□ -0.02
SSU72-203ENST00000378725 OR4F5Q8NH21 305 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 PLSCR3Q9NRY6 295 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 V9GYH0 126 aa14.95□□□□□ -0.02
SSU72-203ENST00000378725 M0QZK8 103 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 AMY1AP04745 511 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 AMY2AP04746 511 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 TBPP20226 339 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 LINC00205P59089 165 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 BLCAPP62952 87 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 MSMO1Q15800 293 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 GLDNQ6ZMI3 551 aaPredicted RBP14.94□□□□□ -0.02
SSU72-203ENST00000378725 OR8H1Q8NGG4 311 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 OR6F1Q8NGZ6 308 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 RBMXL1Q96E39 390 aaKnown RBP14.94□□□□□ -0.02
SSU72-203ENST00000378725 MOB4Q9Y3A3 225 aa14.94□□□□□ -0.02
SSU72-203ENST00000378725 A0A1B0GUS0 222 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 CD74P04233 296 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 DUTP33316 252 aaKnown RBP14.93□□□□□ -0.02
SSU72-203ENST00000378725 EIF4EBP1Q13541 118 aaPredicted RBP14.93□□□□□ -0.02
SSU72-203ENST00000378725 AWAT1Q58HT5 328 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 C11orf88Q6PI97 169 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 OR4C13Q8NGP0 309 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 LINC01006Q8NI28 216 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 RITA1Q96K30 269 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 ZNF2Q9BSG1 426 aaPredicted RBP14.93□□□□□ -0.02
SSU72-203ENST00000378725 ZNF702PQ9H963 129 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 BEX1Q9HBH7 125 aa14.93□□□□□ -0.02
SSU72-203ENST00000378725 CLPSL1A2RUU4 121 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms