RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EBLN2Q6P2I7 272 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 IP6K3Q96PC2 410 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 METTL26Q96S19 204 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 A0A1B0GUT8 65 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 F8W1H4 67 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 ZNF252P-AS1Q0IIN9 211 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 SHISA6Q6ZSJ9 500 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 GPR132Q9UNW8 380 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 CADP27708 2225 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 ADAD2Q8NCV1 583 aaKnown RBP7.64□□□□□ -1.19
LIG3-202ENST00000378526 TMEM190Q8WZ59 177 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 ATP23Q9Y6H3 246 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 DIP2BQ9P265 1576 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GAGE12JA6NER3 117 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 SCRG1O75711 98 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GAGE7O76087 117 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GAGE12FP0CL80 117 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GAGE12GP0CL81 117 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GAGE12IP0CL82 117 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GAGE4Q13068 117 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 DRAM1Q8N682 238 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 MRGPRFQ96AM1 343 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 TIMP1P01033 207 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 PF4V1P10720 104 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 HOXD3P31249 432 aaPredicted RBP7.64□□□□□ -1.19
LIG3-202ENST00000378526 INSM1Q01101 510 aaPredicted RBP7.64□□□□□ -1.19
LIG3-202ENST00000378526 RTL10Q7L3V2 364 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 MZB1Q8WU39 189 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 PRSS27Q9BQR3 290 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 CHST5Q9GZS9 411 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 TMEM56-RWDD3S4R434 201 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 APOHP02749 345 aaPredicted RBP7.64□□□□□ -1.19
LIG3-202ENST00000378526 ZNF56Q15929 161 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 RPS19BP1Q86WX3 136 aaKnown RBP7.64□□□□□ -1.19
LIG3-202ENST00000378526 TDHQ8IZJ6 230 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 COA4Q9NYJ1 87 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 SLC25A37Q9NYZ2 338 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 TMEFF2Q9UIK5 374 aaPredicted RBP7.64□□□□□ -1.19
LIG3-202ENST00000378526 MED12LQ86YW9 2145 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 WNT5AP41221 380 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 ADAMTSL4Q6UY14 1074 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 LOC105371242A0A075B767 164 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 PPIAL4CA0A0B4J2A2 164 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 PPIAL4GP0DN37 164 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 ANKRD29Q8N6D5 301 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 GNB1LQ9BYB4 327 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 MS4A5Q9H3V2 200 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 DYSFO75923 2080 aa7.64□□□□□ -1.19
LIG3-202ENST00000378526 TARM1B6A8C7 271 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 STARD6P59095 220 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 EFNB1P98172 346 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 GAPTQ8N292 157 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 TAF15Q92804 592 aaKnown RBP eCLIP7.63□□□□□ -1.19
LIG3-202ENST00000378526 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 SOSTQ9BQB4 213 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 DDX60Q8IY21 1712 aaKnown RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 PLA2G10O15496 165 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 TSPOP30536 169 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 TNFRSF4P43489 277 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 CLDN2P57739 230 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 NXPH1P58417 271 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 ZP1P60852 638 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 RTP5Q14D33 572 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 AGERQ15109 404 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 ZADH2Q8N4Q0 377 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 GVQW1Q8N7I0 195 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 MORN4Q8NDC4 146 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 DHHO43323 396 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 NDUFA3O95167 84 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 TGFAP01135 160 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 HOXD9P28356 352 aaPredicted RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 FUT5Q11128 374 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 TNXAQ16473 311 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 OR4A5Q8NH83 315 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 C4orf45Q96LM5 186 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 NRSN2Q9GZP1 204 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 WRAP73Q9P2S5 460 aaPredicted RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 HILPDAQ9Y5L2 63 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 RIMS1Q86UR5 1692 aaKnown RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 EDN1P05305 212 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 HTN1P15515 57 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 C1orf61Q13536 156 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 SRSF12Q8WXF0 261 aaKnown RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 OR2H1Q9GZK4 316 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 GLRX2Q9NS18 164 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 MYOM1P52179 1685 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 A0A087WUJ7 227 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 A0A1B0GX78 115 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 CEACAM18A8MTB9 384 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 H0YIG0 161 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 CDC42EP2O14613 210 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 CTSVO60911 334 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 GABRG2P18507 467 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 PRTN3P24158 256 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 CX3CL1P78423 397 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 LYZL2Q7Z4W2 148 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms