RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MUC15Q8N387 334 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 MARC2Q969Z3 335 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 GPR146Q96CH1 333 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 RHOFQ9HBH0 211 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 SERTAD4Q9NUC0 356 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 WSB1Q9Y6I7 421 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 SH2D7A6NKC9 451 aaPredicted RBP6.81□□□□□ -1.32
CKAP2-203ENST00000378037 E5RGE8 158 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 PRSS44E7EML9 344 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 LDLRAD4O15165 306 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 TNFRSF1AP19438 455 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 CHRNB4P30926 498 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 OTX1P32242 354 aaPredicted RBP6.81□□□□□ -1.32
CKAP2-203ENST00000378037 ADIRFQ15847 76 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 SSX2Q16385 188 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 KCNMB1Q16558 191 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 ATRAIDQ6UW56 229 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 WDR31Q8NA23 367 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 FRZBQ92765 325 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 LHX4Q969G2 390 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 RHOVQ96L33 236 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 CMTM3Q96MX0 182 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 TPPP3Q9BW30 176 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 FAM212BQ9NTI7 297 aaPredicted RBP6.81□□□□□ -1.32
CKAP2-203ENST00000378037 IGKV1-6A0A0C4DH72 117 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 A0A0G2JRQ6 117 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RNF222A6NCQ9 220 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 GNLYP22749 145 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 MSMO1Q15800 293 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 LPCAT3Q6P1A2 487 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 GLRX5Q86SX6 157 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 FAM90A1Q86YD7 464 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 MISP3Q96FF7 219 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 MEGF10Q96KG7 1140 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 CHODLQ9H9P2 273 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 PLEKHA3Q9HB20 300 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RAB18Q9NP72 206 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 IL36GQ9NZH8 169 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 CLCF1Q9UBD9 225 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 DKK4Q9UBT3 224 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 LINC00527Q9UJ94 153 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 TNFSF18Q9UNG2 199 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 DPRXA6NFQ7 191 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 A8MXE2 369 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 SLC31A2O15432 143 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 TBPP20226 339 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 BTF3P20290 206 aaKnown RBP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 FGF7P21781 194 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RAB2AP61019 212 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RPS23P62266 143 aaKnown RBP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 EWSR1Q01844 656 aaKnown RBP eCLIP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 SLC38A11Q08AI6 406 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 SOHLH1Q5JUK2 328 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 NCR3LG1Q68D85 454 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 PRSS54Q6PEW0 395 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 C1orf87Q8N0U7 546 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 MRPL30Q8TCC3 161 aaKnown RBP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 R3HDM4Q96D70 268 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 C14orf79Q96F83 325 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 COMMD5Q9GZQ3 224 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 TLNRD1Q9H1K6 362 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 IGKV3D-15A0A087WSY6 115 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RPS10-NUDT3A0A1W2PQS6 291 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 OR7C2O60412 319 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 CD74P04233 296 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 ZNF14P17017 642 aaPredicted RBP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 DTYMKP23919 212 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 ATP6V0CP27449 155 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RPS10P46783 165 aaKnown RBP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 VAX1Q5SQQ9 334 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 TMEM211Q6ICI0 200 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 PRR27Q6MZM9 219 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 C19orf35Q6ZS72 473 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 SEM1Q6ZVN7 128 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 BVESQ8NE79 360 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 OR10P1Q8NGE3 313 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 FAM57AQ8TBR7 257 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 TMEM45BQ96B21 275 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 RARRES2Q99969 163 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
CKAP2-203ENST00000378037 LIN7CQ9NUP9 197 aaKnown RBP6.8□□□□□ -1.32
CKAP2-203ENST00000378037 LOC390937A0A1W2PQ73 354 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 SYNGR2O43760 224 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 SLC25A17O43808 307 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 IGHV3-23P01764 117 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 OR8U8P0C7N1 319 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 CD37P11049 281 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 SLC25A6P12236 298 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 B2MP61769 119 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 RPL30P62888 115 aaKnown RBP6.79□□□□□ -1.32
CKAP2-203ENST00000378037 LCN2P80188 198 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 LRRC10Q5BKY1 277 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 LYPD2Q6UXB3 125 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 ACP7Q6ZNF0 438 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 SLC25A31Q9H0C2 315 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 PPIAL4EA0A075B759 164 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 PPIAL4DF5H284 164 aa6.79□□□□□ -1.32
CKAP2-203ENST00000378037 PPIAL4FP0DN26 164 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms