RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FCER1GP30273 86 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 RPEL1Q2QD12 228 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 TUSC1Q2TAM9 212 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 NHLRC2Q8NBF2 726 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 A1L4Q6 167 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 CXorf1O96002 111 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 BSXQ3C1V8 233 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 METTL1Q9UBP6 276 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 ANKRD36A6QL64 1941 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 NPBWR2P48146 333 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 CCL19Q99731 98 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 LOC105371242A0A075B767 164 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 IGHV3-72A0A0B4J1Y9 119 aa15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 ZNF552Q9H707 407 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-202ENST00000377298 PHOX2AO14813 284 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 LIPFP07098 398 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 STARD4Q96DR4 205 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 PITPNC1Q9UKF7 332 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 IGKV1D-43A0A0B4J1Z2 117 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 TPPP2P59282 170 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 DPPA3Q6W0C5 159 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 MEGF10Q96KG7 1140 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 PARP11Q9NR21 331 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 RALYQ9UKM9 306 aaKnown RBP15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 THSD7BQ9C0I4 1608 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 LHX2P50458 406 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 ABLIM2Q6H8Q1 611 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 CBLN2Q8IUK8 224 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 SNCGO76070 127 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 CLDN18P56856 261 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 SERF2P84101 59 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 ABHD12Q8N2K0 398 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 GREB1Q4ZG55 1949 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 SBF1O95248 1867 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 MMP7P09237 267 aaPredicted RBP15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 TMEM186Q96B77 213 aa15.3■□□□□ 0.04
CLSTN1-202ENST00000377298 MTCL1Q9Y4B5 1905 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 PDE6DO43924 150 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 MPDU1O75352 247 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 SLC35E4Q6ICL7 350 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 WDR73Q6P4I2 378 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 NPDC1Q9NQX5 325 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 FOXH1O75593 365 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 HTN1P15515 57 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 GLIPR1P48060 266 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM222BQ8WU58 562 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 CXCL2P19875 107 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 ARF6P62330 175 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 OR10D4PQ8NGN7 298 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 C1QTNF5Q9BXJ0 243 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 SEC11CQ9BY50 192 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 HIGD1AQ9Y241 93 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM90A26D6RGX4 464 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 HYPMO75409 117 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 COMPP49747 757 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 SELENOTP62341 195 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 FGFRL1Q8N441 504 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 TMEM252Q8N6L7 170 aa15.29■□□□□ 0.04
CLSTN1-202ENST00000377298 LOXL3P58215 753 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 P2RX4Q99571 388 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 ZNF362Q5T0B9 420 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 WFDC3Q8IUB2 231 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 TMEM37Q8WXS4 190 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 CLEC7AQ9BXN2 247 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM157CP0CG43 387 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 HIST1H1EP10412 219 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 P2RY4P51582 365 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM74A3Q4VXF1 159 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 PCSK4Q6UW60 755 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 LOC102723971A0A1B0GUV8 181 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 IGSF23A1L1A6 192 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 CEACAM18A8MTB9 384 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 IGHV1-2P23083 117 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 C9orf106Q8NAJ2 232 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 OR10G8Q8NGN5 311 aa15.28■□□□□ 0.04
CLSTN1-202ENST00000377298 FCN1O00602 326 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 DEDDO75618 318 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 UCP3P55916 312 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 TMEM255AQ5JRV8 349 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 C16orf82Q7Z2V1 217 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 IL22RA2Q969J5 263 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 IGHV2OR16-5A0A0B4J2B6 119 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 SPINK4O60575 86 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 FABP4P15090 132 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 COX19Q49B96 90 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 ANAPC16Q96DE5 110 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 FAM210BQ96KR6 192 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 RAXQ9Y2V3 346 aa15.27■□□□□ 0.04
CLSTN1-202ENST00000377298 MFNGO00587 321 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 PAGE4O60829 102 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 PF4V1P10720 104 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 USF1P22415 310 aaPredicted RBP15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 SLC16A13Q7RTY0 426 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 TMEM106BQ9NUM4 274 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 ARL2-SNX15V9GYD0 113 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 ID1P41134 155 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 OVCH2Q7RTZ1 564 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 SPTBN2O15020 2390 aa15.27■□□□□ 0.03
CLSTN1-202ENST00000377298 RLFQ13129 1914 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms