RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 RWDD2BP57060 319 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 TSPEAR-AS2P59090 65 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 FGF12P61328 243 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 ZNF117Q03924 483 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 ACSBG2Q5FVE4 666 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 RASL11AQ6T310 242 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 TMEM251Q8N6I4 163 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 ASB13Q8WXK3 278 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 STACQ99469 402 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 TBX5Q99593 518 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 C11orf1Q9H5F2 150 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 ZNHIT6Q9NWK9 470 aaKnown RBP0.89□□□□□ -2.27
VPS13A-206ENST00000376646 A0A0J9YX75 114 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 TRAPPC3O43617 180 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 COX5BP10606 129 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 CD36P16671 472 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 CSRP1P21291 193 aaKnown RBP0.89□□□□□ -2.27
VPS13A-206ENST00000376646 ATP6V0CP27449 155 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 BLVRBP30043 206 aaPredicted RBP0.89□□□□□ -2.27
VPS13A-206ENST00000376646 OR10J1P30954 320 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 OPRM1P35372 400 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 GNA13Q14344 377 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 CCDC121Q6ZUS5 278 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 FAM19A5Q7Z5A7 132 aaPredicted RBP0.89□□□□□ -2.27
VPS13A-206ENST00000376646 OR4C16Q8NGL9 310 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 DDI1Q8WTU0 396 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 Q8WTZ3 238 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 KCTD7Q96MP8 289 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 CDCA4Q9BXL8 241 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 SMDT1Q9H4I9 107 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 SPANXB1Q9NS25 103 aaPredicted RBP0.89□□□□□ -2.27
VPS13A-206ENST00000376646 A0A1W2PP64 1363 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 ABCA2Q9BZC7 2435 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 TRAV8-1A0A0A6YYK1 113 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 IGHV3-73A0A0B4J1V6 119 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 ODF3BA8MYP8 253 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 M0R381 172 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 ZNF189O75820 626 aaPredicted RBP0.88□□□□□ -2.27
VPS13A-206ENST00000376646 PSMG1O95456 288 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 IL6P05231 212 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CD7P09564 240 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 ZNF7P17097 686 aaPredicted RBP0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CRHBPP24387 322 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CRYBB3P26998 211 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CD200P41217 278 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CA7P43166 264 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 SERPINB10P48595 397 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 BLVRAP53004 296 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 EMP2P54851 167 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 PPP1R1AQ13522 171 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 TMEM176BQ3YBM2 270 aaPredicted RBP0.88□□□□□ -2.27
VPS13A-206ENST00000376646 NAA40Q86UY6 237 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 BAP18Q8IXM2 172 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 C1orf174Q8IYL3 243 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 PHOSPHO2Q8TCD6 241 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 TMBIM1Q969X1 311 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CMTM5Q96DZ9 223 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 DHRS9Q9BPW9 319 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 MND1Q9BWT6 205 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 DERL2Q9GZP9 239 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 OR51B6Q9H340 312 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 HHLA2Q9UM44 414 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 CCL26Q9Y258 94 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 MMACHCQ9Y4U1 282 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 OTOFQ9HC10 1997 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 MUC6Q6W4X9 2439 aa0.88□□□□□ -2.27
VPS13A-206ENST00000376646 A0A0A6YYH2 397 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 DHRS12A0PJE2 317 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 A6NJ64 397 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 GSTZ1O43708 216 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-206ENST00000376646 TYMSP04818 313 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 NPPCP23582 126 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 CD79BP40259 229 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 TAS2R45P59539 299 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 FABP5Q01469 135 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 FAM151BQ6UXP7 276 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 TMEM156Q8N614 296 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 C16orf78Q8WTQ4 265 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 PACRGQ96M98 296 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-206ENST00000376646 TMEM109Q9BVC6 243 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 SLC2A9Q9NRM0 540 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 NKIRAS1Q9NYS0 192 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 EMC3Q9P0I2 261 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 PCYT1BQ9Y5K3 369 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-206ENST00000376646 PLCH2O75038 1416 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 CHD5Q8TDI0 1954 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 MYO9BQ13459 2157 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 THSD7AQ9UPZ6 1657 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 TRGV4A0A0C4DH28 118 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 OR11H12B2RN74 326 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 CCL3P10147 92 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 GABRA4P48169 554 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 CXCR4P61073 352 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 HLA-DRB3P79483 266 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 MGAT3Q09327 533 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 MLLT11Q13015 90 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-206ENST00000376646 MED21Q13503 144 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 JOSD1Q15040 202 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-206ENST00000376646 CST9Q5W186 159 aa0.87□□□□□ -2.27
VPS13A-206ENST00000376646 LGALS9CQ6DKI2 356 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms