RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 LCNL1Q6ZST4 164 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 COMMD1Q8N668 190 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 OR5AN1Q8NGI8 311 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 OR8U1Q8NH10 309 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 ST6GALNAC5Q9BVH7 336 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 GON7Q9BXV9 100 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 TOLLIPQ9H0E2 274 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLCN6-203ENST00000376490 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
CLCN6-203ENST00000376490 OR5H14A6NHG9 310 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 NDUFA3O95167 84 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 TNFAIP8O95379 198 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 PF4P02776 101 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-203ENST00000376490 IGF1P05019 195 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
CLCN6-203ENST00000376490 GSTP1P09211 210 aaKnown RBP11.19□□□□□ -0.62
CLCN6-203ENST00000376490 IGLL1P15814 213 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 ARL6IP1Q15041 203 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.624e-7■■■■□ 26.7
CLCN6-203ENST00000376490 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 LIN54Q6MZP7 749 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 ZNF383Q8NA42 475 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 FBXL15Q9H469 300 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 RHBDL2Q9NX52 303 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 KIAA1456Q9P272 454 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 WASHC3Q9Y3C0 194 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
CLCN6-203ENST00000376490 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 G3V318 75 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 M0R1X1 148 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 FCN1O00602 326 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 RRP9O43818 475 aaKnown RBP11.18□□□□□ -0.62
CLCN6-203ENST00000376490 HLA-DRB1P01911 266 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 VDAC1P21796 283 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 LSM3P62310 102 aaKnown RBP11.18□□□□□ -0.62
CLCN6-203ENST00000376490 CFHR3Q02985 330 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 KPRPQ5T749 579 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-203ENST00000376490 Q6ZS49 121 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 NUDCD2Q8WVJ2 157 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 OR51J1Q9H342 316 aa11.18□□□□□ -0.62
CLCN6-203ENST00000376490 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 RRHO14718 337 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 AIREO43918 545 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 SSX5O60225 188 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 DIRAS3O95661 229 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 IGHG4P01861 327 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 TFAP2AP05549 437 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 DTYMKP23919 212 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 RPS19P39019 145 aaKnown RBP11.17□□□□□ -0.62
CLCN6-203ENST00000376490 FOXE3Q13461 319 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 CXorf66Q5JRM2 361 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-203ENST00000376490 ETV3LQ6ZN32 361 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 SLC25A38Q96DW6 304 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 OR2D2Q9H210 308 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 PARP11Q9NR21 331 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 SDHAF2Q9NX18 166 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
CLCN6-203ENST00000376490 TRAV18A0A075B6X5 111 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 J3QRK9 145 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 RBBP9O75884 186 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 SCGNO76038 276 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 ELANEP08246 267 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 PPIFP30405 207 aaKnown RBP11.16□□□□□ -0.62
CLCN6-203ENST00000376490 THBS3P49746 956 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 GNG2P59768 71 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 RPS16P62249 146 aaKnown RBP11.16□□□□□ -0.62
CLCN6-203ENST00000376490 CX3CL1P78423 397 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 PITPNAQ00169 270 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 PLGLAQ15195 96 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 PSG5Q15238 335 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 TIMM50Q3ZCQ8 353 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
CLCN6-203ENST00000376490 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-203ENST00000376490 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-203ENST00000376490 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 CLCC1Q96S66 551 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 RNF5Q99942 180 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 DCSTAMPQ9H295 470 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 ZNF580Q9UK33 172 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 RBM7Q9Y580 266 aaKnown RBP11.16□□□□□ -0.62
CLCN6-203ENST00000376490 ETV7Q9Y603 341 aa11.16□□□□□ -0.62
CLCN6-203ENST00000376490 TGP01266 2768 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 PSMB8P28062 276 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms