RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 OR51H1Q8NH63 302 aa9.14□□□□□ -0.95
PDPN-202ENST00000376057 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
PDPN-202ENST00000376057 PATZ1Q9HBE1 687 aaKnown RBP9.14□□□□□ -0.95
PDPN-202ENST00000376057 MMP24Q9Y5R2 645 aa9.14□□□□□ -0.95
PDPN-202ENST00000376057 U3KQ87 197 aa9.14□□□□□ -0.95
PDPN-202ENST00000376057 ACACBO00763 2458 aa9.14□□□□□ -0.95
PDPN-202ENST00000376057 E5RGE8 158 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 TNFSF12O43508 249 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 PRB1P04280 392 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 P2RY1P47900 373 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 BRWD1-AS2P59051 145 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 GPR157Q5UAW9 335 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 FAM71E2Q8N5Q1 922 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 NSG2Q9Y328 171 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 IGHV3-43A0A0B4J1X8 118 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 K7EPK0 472 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 TAAR5O14804 337 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 ST8SIA5O15466 376 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 IGHV3-43DP0DP04 118 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 THBS3P49746 956 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 RPL30P62888 115 aaKnown RBP9.13□□□□□ -0.95
PDPN-202ENST00000376057 C1orf122Q6ZSJ8 110 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 ZNF833PQ6ZTB9 187 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 SLC51BQ86UW2 128 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 C11orf42Q8N5U0 333 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 UBTD1Q9HAC8 227 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 KALRNO60229 2985 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 BCL2L11O43521 198 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 NUP62P37198 522 aaPredicted RBP9.13□□□□□ -0.95
PDPN-202ENST00000376057 WDR25Q64LD2 544 aaPredicted RBP9.13□□□□□ -0.95
PDPN-202ENST00000376057 RNF150Q9ULK6 438 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 SESN1Q9Y6P5 492 aa9.13□□□□□ -0.95
PDPN-202ENST00000376057 KIAA1324LA8MWY0 1029 aaPredicted RBP9.12□□□□□ -0.95
PDPN-202ENST00000376057 HPRT1P00492 218 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 IGKV1-5P01602 117 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 LPAR6P43657 344 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
PDPN-202ENST00000376057 FGFRL1Q8N441 504 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 KIR3DL3Q8N743 410 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 OR1S1Q8NH92 325 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 STOML3Q8TAV4 291 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 OR5AC2Q9NZP5 309 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
PDPN-202ENST00000376057 LINC00473A8K010 186 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 LYNX1G3V0Z9 82 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 LY86O95711 162 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 IFNA7P01567 189 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 LYNX1P0DP58 116 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 SRSF1Q07955 248 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDPN-202ENST00000376057 PDLIM3Q53GG5 364 aaPredicted RBP9.12□□□□□ -0.95
PDPN-202ENST00000376057 PRAMEF5Q5TYX0 476 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 MARVELD3Q96A59 401 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 PRELID3BQ9Y3B1 194 aa9.12□□□□□ -0.95
PDPN-202ENST00000376057 MMP23AO75900 390 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 IGHV1-8P0DP01 117 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 RRASP10301 218 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 NKX2-1P43699 371 aaPredicted RBP9.11□□□□□ -0.95
PDPN-202ENST00000376057 TAS2R30P59541 319 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 UBA52P62987 128 aaKnown RBP9.11□□□□□ -0.95
PDPN-202ENST00000376057 POU2AF1Q16633 256 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 KIAA2026Q5HYC2 2103 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 DHRS7BQ6IAN0 325 aaPredicted RBP9.11□□□□□ -0.95
PDPN-202ENST00000376057 SPAG16Q8N0X2 631 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 TCTEX1D2Q8WW35 142 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 S1PR3Q99500 378 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 ARL6Q9H0F7 186 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 SAA2-SAA4A0A096LPE2 208 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 hCG_1809904A0A1W2PP81 198 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 A0A1W2PPE2 198 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 A0A1W2PR64 198 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 A0A1W2PRV1 198 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 A8MXK9 166 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 M0R1W7 72 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 SLC31A2O15432 143 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 SAA2P0DJI9 122 aaPredicted RBP9.11□□□□□ -0.95
PDPN-202ENST00000376057 HKR1P10072 659 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 LRRC37A5PQ49AS3 106 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 ZNF680Q8NEM1 530 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 OR9G1Q8NH87 305 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 H1FXQ92522 213 aaKnown RBP9.11□□□□□ -0.95
PDPN-202ENST00000376057 TMEM186Q96B77 213 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 PCGF1Q9BSM1 259 aa9.11□□□□□ -0.95
PDPN-202ENST00000376057 POLR3KQ9Y2Y1 108 aaPredicted RBP9.11□□□□□ -0.95
PDPN-202ENST00000376057 KANTRA0A1W2PQU2 76 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 J3QR06 171 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 PPIHO43447 177 aaKnown RBP9.1□□□□□ -0.95
PDPN-202ENST00000376057 FGF2P09038 288 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 RNF224P0DH78 156 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 OMGP23515 440 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 SSTR2P30874 369 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 BEND2Q8NDZ0 799 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 ST6GALNAC6Q969X2 333 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 RRNAD1Q96FB5 475 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms