RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 EGR1P18146 543 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 CLDN18P56856 261 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 LINC00205P59089 165 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 NCR3LG1Q68D85 454 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 FAM58AQ8N1B3 248 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 FDCSPQ8NFU4 85 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 OR5P3Q8WZ94 311 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 HIST1H2AAQ96QV6 131 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 SLC39A9Q9NUM3 307 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 PRSS50Q9UI38 385 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 KLF13Q9Y2Y9 288 aaPredicted RBP12.8□□□□□ -0.36
MSH5-203ENST00000375750 GVINP1Q7Z2Y8 2422 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 TRBV24-1A0A075B6N3 115 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 RAMP3O60896 148 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 PFN1P07737 140 aaKnown RBP12.8□□□□□ -0.36
MSH5-203ENST00000375750 CTXN2P0C2S0 81 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 SELLP14151 372 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 CD46P15529 392 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 CEBPDP49716 269 aaPredicted RBP12.8□□□□□ -0.36
MSH5-203ENST00000375750 PMP22Q01453 160 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 TMEM41BQ5BJD5 291 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 DEFB127Q9H1M4 99 aa12.8□□□□□ -0.36
MSH5-203ENST00000375750 PTPRZ1P23471 2315 aaPredicted RBP12.79□□□□□ -0.36
MSH5-203ENST00000375750 A0A1W2PPQ1 181 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 DEGS1O15121 323 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 CLDN1O95832 211 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 RPL23P62829 140 aaKnown RBP12.79□□□□□ -0.36
MSH5-203ENST00000375750 SLC38A11Q08AI6 406 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 PNRC1Q12796 327 aaPredicted RBP12.79□□□□□ -0.36
MSH5-203ENST00000375750 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 RNFT1Q5M7Z0 435 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 ASCL5Q7RTU5 278 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 ZNF664Q8N3J9 261 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 TAF15Q92804 592 aaKnown RBP eCLIP12.79□□□□□ -0.36
MSH5-203ENST00000375750 CLN8Q9UBY8 286 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 XKRY2A2RUG3 117 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 OPN1MWP04001 364 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 OPN1MW2P0DN77 364 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 OPN1MW3P0DN78 364 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 WNT5AP41221 380 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 SRSF7Q16629 238 aaKnown RBP eCLIP12.79□□□□□ -0.365e-6■■■□□ 17.5
MSH5-203ENST00000375750 ZNF66Q6ZN08 573 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 HIPK2Q9H2X6 1198 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 BOD1L1Q8NFC6 3051 aa12.79□□□□□ -0.36
MSH5-203ENST00000375750 CEP250Q9BV73 2442 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 COL8A2P25067 703 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 S100GP29377 79 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 TMEM241Q24JQ0 296 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 TMEM242Q9NWH2 141 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 A0A1B0GUS0 222 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 TSTD3H0UI37 97 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 KRASP01116 189 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 G6PCP35575 357 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 CEACAM6P40199 344 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 GALR1P47211 349 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 TFF3Q07654 80 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 ZNF816Q0VGE8 651 aaPredicted RBP12.78□□□□□ -0.36
MSH5-203ENST00000375750 BSXQ3C1V8 233 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 FGFRL1Q8N441 504 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 ZNF808Q8N4W9 903 aaPredicted RBP12.78□□□□□ -0.36
MSH5-203ENST00000375750 OR5A2Q8NGI9 324 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 OR1P1Q8NH06 330 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 APOBEC3DQ96AK3 386 aaPredicted RBP12.78□□□□□ -0.36
MSH5-203ENST00000375750 OR4F4Q96R69 305 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 TRAPPC2LQ9UL33 140 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 AKAP13Q12802 2813 aa12.78□□□□□ -0.36
MSH5-203ENST00000375750 PRR14LQ5THK1 2151 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 SOX8P57073 446 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.36
MSH5-203ENST00000375750 SLC10A1Q14973 349 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 SAXO1Q8IYX7 474 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 DRAM1Q8N682 238 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 PARLQ9H300 379 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 NAT8Q9UHE5 227 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 FUT9Q9Y231 359 aa12.77□□□□□ -0.36
MSH5-203ENST00000375750 GNB2P62879 340 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 Q6P435 159 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 OR51G1Q8NGK1 321 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 C12orf49Q9H741 205 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 SRD5A3Q9H8P0 318 aa12.77□□□□□ -0.37
MSH5-203ENST00000375750 C1QTNF9BB2RNN3 333 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 TNFSF10P50591 281 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
MSH5-203ENST00000375750 HBG1P69891 147 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 HBG2P69892 147 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 DEFB109BQ30KR1 87 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 NUFIP2Q7Z417 695 aaKnown RBP12.76□□□□□ -0.37
MSH5-203ENST00000375750 WDR86Q86TI4 376 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 PSMG3Q9BT73 122 aaPredicted RBP12.76□□□□□ -0.37
MSH5-203ENST00000375750 IL18BPO95998 194 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 CHRNA7P36544 502 aa12.76□□□□□ -0.37
MSH5-203ENST00000375750 RPL30P62888 115 aaKnown RBP12.76□□□□□ -0.37
MSH5-203ENST00000375750 DSPP15924 2871 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms