RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PAFAH1B2P68402 229 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 MAFAQ8NHW3 353 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 GMPPAQ96IJ6 420 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF552Q9H707 407 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 HEXA-AS1Q9H8Q6 139 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 TREM2Q9NZC2 230 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 DMRT1Q9Y5R6 373 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 HIST1H1EP10412 219 aaKnown RBP9.92□□□□□ -0.82
PTCH1-203ENST00000375274 PRRX1P54821 245 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF343Q6P1L6 599 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 BHLHA15Q7RTS1 189 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-203ENST00000375274 TMEM251Q8N6I4 163 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 STXBP6Q8NFX7 210 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 OR1L8Q8NGR8 309 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 SMIM8Q96KF7 97 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 HSPB9Q9BQS6 159 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 RBKSQ9H477 322 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 CACNA1GO43497 2377 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 IGKV3D-11A0A0A0MRZ8 115 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 CLDN14O95500 239 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 SLC35B1P78383 322 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 TGIF2LYQ8IUE0 185 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
PTCH1-203ENST00000375274 OR2V2Q96R30 315 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 RTBDNQ9BSG5 229 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-203ENST00000375274 PRDM14Q9GZV8 571 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 WNT5BQ9H1J7 359 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 CISD1Q9NZ45 108 aaKnown RBP9.92□□□□□ -0.82
PTCH1-203ENST00000375274 THYN1Q9P016 225 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 A0A1W2PPE3 182 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 MGST3O14880 152 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 FGF5P12034 268 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 COL10A1Q03692 680 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 TNFRSF9Q07011 255 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 WDFY1Q8IWB7 410 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 GGACTQ9BVM4 153 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 PKIBQ9C010 78 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 B4E171 279 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 SMPD2O60906 423 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 MT-ND6P03923 174 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 TSPAN7P41732 249 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 WIPI2Q9Y4P8 454 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 LTBP1Q14766 1721 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF646O15015 1829 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-203ENST00000375274 PSME4Q14997 1843 aa9.92□□□□□ -0.82
PTCH1-203ENST00000375274 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 K7ESF4 209 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 UCP2P55851 309 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 GNB2P62879 340 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 SAXO1Q8IYX7 474 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 OR1L1Q8NH94 360 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 TM2D1Q9BX74 207 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 ONECUT1Q9UBC0 465 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 WASHC3Q9Y3C0 194 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 DOCK4Q8N1I0 1966 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 ANK1P16157 1881 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 MTCL1Q9Y4B5 1905 aaKnown RBP9.91□□□□□ -0.82
PTCH1-203ENST00000375274 APCSP02743 223 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 RSPO4Q2I0M5 234 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-203ENST00000375274 GFI1Q99684 422 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 GOLT1BQ9Y3E0 138 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 A0A0G2JMZ2 1700 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 A0A1W2PR77 199 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 LRRC37A2A6NM11 1700 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 ISLRO14498 428 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 RAB29O14966 203 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF826PQ6ZT77 177 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF645Q8N7E2 425 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 NFAM1Q8NET5 270 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-203ENST00000375274 RNF126Q9BV68 326 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 PARLQ9H300 379 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 A0A1W2PQM1 296 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 AGAP20933 346 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 SPEM2Q0P670 501 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 RND1Q92730 232 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 LSM10Q969L4 123 aaKnown RBP9.91□□□□□ -0.82
PTCH1-203ENST00000375274 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
PTCH1-203ENST00000375274 IGHV3OR15-7A0A075B7D8 119 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 WNT5AP41221 380 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 ELOVL1Q9BW60 279 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 SRXN1Q9BYN0 137 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 SAP30LQ9HAJ7 183 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 POLEQ07864 2286 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 KBTBD11O94819 623 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 CD99P14209 185 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 MPV17P39210 176 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 TRIP6Q15654 476 aaKnown RBP9.9□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF506Q5JVG8 444 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 MIC13Q5XKP0 118 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 PMS2CLQ68D20 193 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 FAM216AQ8WUB2 273 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 VWCEQ96DN2 955 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 PERPQ96FX8 193 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 DOCK6Q96HP0 2047 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 TMEM250H0YL14 139 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 ZG16O60844 167 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 TIAF1O95411 115 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 PCOLCEQ15113 449 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms