RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZNF718Q3SXZ3 478 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 Q6ZPA2 131 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 BHLHA15Q7RTS1 189 aaPredicted RBP6.96□□□□□ -1.3
UBR4-202ENST00000375224 MYPOPQ86VE0 399 aaPredicted RBP6.96□□□□□ -1.3
UBR4-202ENST00000375224 OR8G5Q8NG78 346 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 MSI2Q96DH6 328 aaKnown RBP6.96□□□□□ -1.3
UBR4-202ENST00000375224 ZNF488Q96MN9 340 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 TXN2Q99757 166 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SPIN2AQ99865 258 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SPIN2BQ9BPZ2 258 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SLC5A7Q9GZV3 580 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SLC25A31Q9H0C2 315 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 CXXC4Q9H2H0 198 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 IL36RNQ9UBH0 155 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 NSG2Q9Y328 171 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 K7EPK0 472 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 GCH1P30793 250 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 TFPI2P48307 235 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 PRRX1P54821 245 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 ERVK11-1P61568 191 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SP6Q3SY56 376 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 Q6P435 159 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.3
UBR4-202ENST00000375224 FAM71E2Q8N5Q1 922 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 OR13D1Q8NGV5 346 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 RDH5Q92781 318 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 STARD4Q96DR4 205 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SNX22Q96L94 193 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 ZNF71Q9NQZ8 489 aaPredicted RBP6.96□□□□□ -1.3
UBR4-202ENST00000375224 UBE2J1Q9Y385 318 aaPredicted RBP6.96□□□□□ -1.3
UBR4-202ENST00000375224 HSPB6O14558 160 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 RHBDL1O75783 438 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TNFSF13O75888 250 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 IGLV1-44P01699 117 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TRGC1P0CF51 173 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 KITLGP21583 273 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 RPL12P30050 165 aaKnown RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 GNRHRP30968 328 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 COMPP49747 757 aaPredicted RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 FHITP49789 147 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 ZNF146Q15072 292 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 CXorf67Q86X51 503 aaPredicted RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 CABLES2Q9BTV7 478 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TMEM222Q9H0R3 208 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 DKK4Q9UBT3 224 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 NPIPB11E5RHQ5 1161 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 KLK10O43240 276 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 ZNF205O95201 554 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 CDS2O95674 445 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 CGAP01215 116 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 FOXF2Q12947 444 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 ZNF154Q13106 437 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 ZNF695Q8IW36 515 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 OR2D3Q8NGH3 330 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TMEM56Q96MV1 263 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 MSL2Q9HCI7 577 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 LSM5Q9Y4Y9 91 aaKnown RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 TMEM56-RWDD3S4R434 201 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 A0A1B0GV72 72 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TIMM8AO60220 97 aaPredicted RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 AGFG2O95081 481 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 HKR1P10072 659 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 ERVS71-1P61550 626 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 GPR157Q5UAW9 335 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 LYZL2Q7Z4W2 148 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TBC1D26Q86UD7 250 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 OR11L1Q8NGX0 322 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 TMEM18Q96B42 140 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 ABHD14BQ96IU4 210 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 OR2W1Q9Y3N9 320 aa6.95□□□□□ -1.3
UBR4-202ENST00000375224 CNOT1A5YKK6 2376 aaKnown RBP6.95□□□□□ -1.3
UBR4-202ENST00000375224 URB1O60287 2271 aaKnown RBP6.94□□□□□ -1.3
UBR4-202ENST00000375224 ESPL1Q14674 2120 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 CDIPTO14735 213 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 CCL25O15444 150 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 ST8SIA3O43173 380 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 WISP2O76076 250 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 JTBO76095 146 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 OR2H2O95918 312 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 GAPDHP04406 335 aaKnown RBP6.94□□□□□ -1.3
UBR4-202ENST00000375224 CECR9P0C854 216 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 DLK1P80370 383 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 UBE2V1Q13404 147 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 C3orf36Q3SXR2 165 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 MBNL2Q5VZF2 373 aaKnown RBP6.94□□□□□ -1.3
UBR4-202ENST00000375224 WDR86Q86TI4 376 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 IL22RA2Q969J5 263 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 SLC35E1Q96K37 410 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 SHANK1Q9Y566 2161 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 MSGN1A6NI15 193 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 SLC33A1O00400 549 aaPredicted RBP6.94□□□□□ -1.3
UBR4-202ENST00000375224 CD5P06127 495 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 GRPP07492 148 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 TIMP3P35625 211 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 MPV17P39210 176 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 GNMTQ14749 295 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 SOHLH1Q5JUK2 328 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 C1orf194Q5T5A4 169 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms