RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 ZNF818PQ6ZRF7 136 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 COL25A1Q9BXS0 654 aaPredicted RBP18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 PLSCR2Q9NRY7 297 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 TBX6O95947 436 aaPredicted RBP18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 STAG3L2P0CL84 134 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 QTRT1Q9BXR0 403 aaKnown RBP18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 ADRA2AP08913 450 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 CD82P27701 267 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 C3AR1Q16581 482 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 CA5BP1Q8WTZ4 195 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 SPINK2P20155 84 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 COX7A1P24310 79 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 RPL24P83731 157 aaKnown RBP18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 C12orf54Q6X4T0 127 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 RAB1CQ92928 201 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 PARLQ9H300 379 aa18.22■□□□□ 0.51
TGFBR1-202ENST00000374994 HYPMO75409 117 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 AICDAQ9GZX7 198 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 MRPL18Q9H0U6 180 aaKnown RBP18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 FGF16O43320 207 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 GAS1P54826 345 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 UCP2P55851 309 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 TFF2Q03403 129 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 ZNF658BQ4V348 819 aaPredicted RBP18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 C1orf210Q8IVY1 113 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 M0R296 226 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 OR4A8P0C604 315 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 RHOVQ96L33 236 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 SLC25A33Q9BSK2 321 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 PARP14Q460N5 1801 aa18.21■□□□□ 0.51
TGFBR1-202ENST00000374994 F8VVB4 439 aa18.21■□□□□ 0.5
TGFBR1-202ENST00000374994 F8VWA3 439 aa18.21■□□□□ 0.5
TGFBR1-202ENST00000374994 TCF21O43680 179 aa18.21■□□□□ 0.5
TGFBR1-202ENST00000374994 ASCL3Q9NQ33 180 aa18.21■□□□□ 0.5
TGFBR1-202ENST00000374994 COL11A1P12107 1806 aaPredicted RBP18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 ATRAIDQ6UW56 229 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 RTBDNQ9BSG5 229 aaPredicted RBP18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 K7N7A8 449 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 SPSB4Q96A44 273 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 C1RLQ9NZP8 487 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 MPV17P39210 176 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 CYP2G1PQ6ZSU1 146 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 RBM14Q96PK6 669 aaKnown RBP18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 WNT5BQ9H1J7 359 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 SPATA45Q537H7 98 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 GBGT1Q8N5D6 347 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 HIGD1AQ9Y241 93 aa18.2■□□□□ 0.5
TGFBR1-202ENST00000374994 ORM1P02763 201 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 AMY1AP04745 511 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 SRP19P09132 144 aaKnown RBP18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 TMEM30BQ3MIR4 351 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 IL36RNQ9UBH0 155 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 P2RY6Q15077 328 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 ZNF207O43670 478 aaKnown RBP18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 UCP1P25874 307 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 HERVK_113P61574 105 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 LY6G6FQ5SQ64 297 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 OR8I2Q8N0Y5 310 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 SNRNP40Q96DI7 357 aaKnown RBP18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 TP53RKQ96S44 253 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 GSN-AS1Q9NRJ2 163 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 SNCGO76070 127 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 RPL30P62888 115 aaKnown RBP18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 GAMTQ14353 236 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 HES3Q5TGS1 186 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 DEFB123Q8N688 67 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
TGFBR1-202ENST00000374994 HSPE1P61604 102 aaKnown RBP18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 SIPA1L1O43166 1804 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 IGKV3D-11A0A0A0MRZ8 115 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 LYPD3O95274 346 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 DIRC2Q96SL1 478 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 MS4A5Q9H3V2 200 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 ZNF729A6NN14 1252 aaPredicted RBP18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 AGFG2O95081 481 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 WDR25Q64LD2 544 aaPredicted RBP18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 MIC13Q5XKP0 118 aa18.18■□□□□ 0.5
TGFBR1-202ENST00000374994 HOXA5P20719 270 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 MC5RP33032 325 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 RPRMQ9NS64 109 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 TDRD15B5MCY1 1934 aaKnown RBP18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 DLL1O00548 723 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 RCC1LQ96I51 464 aaKnown RBP18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 JPT1Q9UK76 154 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 TRIP12Q14669 1992 aaPredicted RBP18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 RAB1BQ9H0U4 201 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 INSIG2Q9Y5U4 225 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 MARCH11A6NNE9 402 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 SIAH2O43255 324 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 HEXA-AS1Q9H8Q6 139 aa18.17■□□□□ 0.5
TGFBR1-202ENST00000374994 WNT5AP41221 380 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 SCNM1Q9BWG6 230 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 CKAP5Q14008 2032 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 CEACAM18A8MTB9 384 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 FAM214BQ7L5A3 538 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 CD3EP07766 207 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 PTGDSP41222 190 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 FAM216AQ8WUB2 273 aa18.16■□□□□ 0.5
TGFBR1-202ENST00000374994 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms