RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZCCHC24Q8N2G6 241 aaKnown RBP14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 FAM216BQ8N7L0 139 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LINC01560Q8TB33 94 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SMIM3Q9BZL3 60 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MAGT1Q9H0U3 335 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GAB2Q9UQC2 676 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MEX3AA1L020 520 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 IGSF23A1L1A6 192 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 FAM24AA6NFZ4 105 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ZNF729A6NN14 1252 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 FAM90A26D6RGX4 464 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GRNP28799 593 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GPR12P47775 334 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 BRWD1-AS2P59051 145 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 NHLH2Q02577 135 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 BAXQ07812 192 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 Q3ZCU0 254 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 FGFRL1Q8N441 504 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TMEM252Q8N6L7 170 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TCTEX1D2Q8WW35 142 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RAB40CQ96S21 281 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 WFDC1Q9HC57 220 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TMEM106BQ9NUM4 274 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GFOD1Q9NXC2 390 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LAMP3Q9UQV4 416 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 IGSF10Q6WRI0 2623 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PPIAL4EA0A075B759 164 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PPIAL4DF5H284 164 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CHST1O43916 411 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RAMP3O60896 148 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TMEM50AO95807 157 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PPIAL4FP0DN26 164 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RAB7AP51149 207 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CAV2P51636 162 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PAX9P55771 341 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LY6DQ14210 128 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LTC4SQ16873 150 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 BTNL3Q6UXE8 466 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SPAG16Q8N0X2 631 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SAT2Q96F10 170 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GINS3Q9BRX5 216 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LPAR3Q9UBY5 353 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PPIAL4AQ9Y536 164 aa14.9□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ADGRG4Q8IZF6 3080 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 LINC00473A8K010 186 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 C17orf98A8MV24 154 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TNFRSF13BO14836 293 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SIAH2O43255 324 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SULT1A2P50226 295 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CLEC9AQ6UXN8 241 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ODF3L1Q8IXM7 274 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CD300LFQ8TDQ1 290 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CA5BP1Q8WTZ4 195 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 IFI27L2Q9H2X8 130 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 KCNJ16Q9NPI9 418 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 WSB1Q9Y6I7 421 aa14.89□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TOR1AO14656 332 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CLDN14O95500 239 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SEC11BP0C7V7 166 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZP3P21754 424 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 LOXP28300 417 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 DUTP33316 252 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 MEF2CQ06413 473 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CDSNQ15517 529 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 IZUMO4Q1ZYL8 232 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF295-AS1Q8N0V1 137 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SMIM8Q96KF7 97 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TMEM204Q9BSN7 226 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TAS2R3Q9NYW6 316 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 IDI2-AS1Q9NZ38 188 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CISD1Q9NZ45 108 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 LINC00312Q9Y6C7 94 aa14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 YLPM1P49750 1951 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-201ENST00000374943 hADV38S2A0JD32 116 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 NUDT19A8MXV4 375 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SHOXO15266 292 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TMPRSS2O15393 492 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SYNGR2O43760 224 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 PROP1O75360 226 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 S1PR2O95136 353 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 PLAUP00749 431 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF134P52741 427 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 RPL23AP62750 156 aaKnown RBP14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 OR10A7Q8NGE5 316 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ABHD14AQ9BUJ0 271 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SLC25A10Q9UBX3 287 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 KRBOX1C9JBD0 128 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 RAB29O14966 203 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 RBFOX2O43251 390 aaKnown RBP eCLIP14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SPP1P10451 314 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 OMGP23515 440 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TAS2R30P59541 319 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TFF3Q07654 80 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF816Q0VGE8 651 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF266Q14584 549 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF672Q499Z4 452 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 MIDNQ504T8 468 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 OR1S2Q8NGQ3 325 aa14.87□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SMG1Q96Q15 3661 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms