RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SELLP14151 372 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 RAB7AP51149 207 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 TLE1Q04724 770 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 CATR1Q13166 79 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 UTF1Q5T230 341 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 OR1S2Q8NGQ3 325 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 UBALD1Q8TB05 177 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 TRGV8A0A0C4DH27 118 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.36□□□□□ -0.75
PRPF4-202ENST00000374199 A0A1B0GW64 132 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 PMS2P5A8MQ11 134 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 SCGB1D2O95969 90 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 AGAP20933 346 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 RAB5CP51148 216 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
PRPF4-202ENST00000374199 NINJ1Q92982 152 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 PRELID1Q9Y255 219 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 NBEAQ8NFP9 2946 aa10.36□□□□□ -0.75
PRPF4-202ENST00000374199 TRAV38-1A0A0B4J264 116 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 LRRC30A6NM36 301 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 SSSCA1O60232 199 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 PVALBP20472 110 aaPredicted RBP10.35□□□□□ -0.75
PRPF4-202ENST00000374199 KIR2DS2P43631 304 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 LPAR6P43657 344 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 CT45A1Q5HYN5 189 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 CT45A3Q8NHU0 189 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 MARC2Q969Z3 335 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 TMEM106BQ9NUM4 274 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 CACNG5Q9UF02 275 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 RPUSD1Q9UJJ7 312 aaKnown RBP10.35□□□□□ -0.75
PRPF4-202ENST00000374199 NUP50Q9UKX7 468 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 SULT1A1P50225 295 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF137PP52743 207 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 FAM71F2Q6NXP2 309 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 CENPVQ7Z7K6 275 aaPredicted RBP10.35□□□□□ -0.75
PRPF4-202ENST00000374199 OR52E5Q8NH55 327 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 CACNA1AO00555 2505 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 FAM24AA6NFZ4 105 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 SYNGR2O43760 224 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 ATG12O94817 140 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 S1PR2O95136 353 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 CD5P06127 495 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 LINC00311Q8N616 119 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 FAM216BQ8N7L0 139 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 EGLN1Q9GZT9 426 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 MS4A5Q9H3V2 200 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 KCNS2Q9ULS6 477 aa10.35□□□□□ -0.75
PRPF4-202ENST00000374199 KIAA2026Q5HYC2 2103 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 CCL21O00585 134 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 GYPAP02724 150 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 CD3EP07766 207 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF266Q14584 549 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 FOXRED2Q8IWF2 684 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 C1orf87Q8N0U7 546 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 NEUROG1Q92886 237 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 SAP30LQ9HAJ7 183 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 SH3BGRL2Q9UJC5 107 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 URB1O60287 2271 aaKnown RBP10.34□□□□□ -0.75
PRPF4-202ENST00000374199 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 TRIM77I1YAP6 450 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 I3L521 148 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 SLC31A2O15432 143 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 CLDN1O95832 211 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ARG1P05089 322 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF16P17020 682 aaPredicted RBP10.34□□□□□ -0.75
PRPF4-202ENST00000374199 GRNP28799 593 aaKnown RBP10.34□□□□□ -0.75
PRPF4-202ENST00000374199 MRPS11P82912 194 aaKnown RBP10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ZNF833PQ6ZTB9 187 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ATP5SQ99766 215 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 CACFD1Q9UGQ2 172 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 PSG11Q9UQ72 335 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 ACACAQ13085 2346 aa10.34□□□□□ -0.75
PRPF4-202ENST00000374199 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 HPRT1P00492 218 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 M6PRP20645 277 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 EPHA1P21709 976 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 CAV2P51636 162 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 CCL8P80075 99 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 EDDM3AQ14507 147 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
PRPF4-202ENST00000374199 CCL13Q99616 98 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 ABHD14AQ9BUJ0 271 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 KCNJ16Q9NPI9 418 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 HRNRQ86YZ3 2850 aaPredicted RBP10.33□□□□□ -0.76
PRPF4-202ENST00000374199 VSTM5A8MXK1 200 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 TEX46H3BTG2 121 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 NDUFA2O43678 99 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 LY86O95711 162 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 PJVKQ0ZLH3 352 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 HEPN1Q6WQI6 88 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms