RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TMEM150CB9EJG8 249 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 TUSC2O75896 110 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 SERPINE2P07093 398 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 SCTP09683 121 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 C3orf79P0CE67 100 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 PSG1P11464 419 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 CNN3Q15417 329 aaKnown RBP10.96□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF776Q68DI1 518 aaPredicted RBP10.96□□□□□ -0.66
PRPF4-201ENST00000374198 SMIM12Q96EX1 92 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 BORCS8Q96FH0 119 aa10.96□□□□□ -0.66
PRPF4-201ENST00000374198 GMPPAQ96IJ6 420 aaPredicted RBP10.96□□□□□ -0.66
PRPF4-201ENST00000374198 SHISA8B8ZZ34 492 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 TRAF3IP2O43734 574 aaPredicted RBP10.95□□□□□ -0.66
PRPF4-201ENST00000374198 TIMP3P35625 211 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 PMP22Q01453 160 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 KRTCAP3Q53RY4 240 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 Q6ZS49 121 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 Q8NFD4 153 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 GJC3Q8NFK1 279 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 OR10G8Q8NGN5 311 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 BCL2L2Q92843 193 aaPredicted RBP10.95□□□□□ -0.66
PRPF4-201ENST00000374198 R4GN57 208 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 SAA2-SAA4A0A096LPE2 208 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 PIGBOS1A0A0B4J2F0 54 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 CD300LBA8K4G0 201 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 IER3P46695 156 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 HIST3H3Q16695 136 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 LHFPL2Q6ZUX7 228 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 MUC15Q8N387 334 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 OR4F17Q8NGA8 305 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 OR1K1Q8NGR3 316 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 SLC37A2Q8TED4 501 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 KCNS1Q96KK3 526 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 CHODLQ9H9P2 273 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 IL36GQ9NZH8 169 aa10.95□□□□□ -0.66
PRPF4-201ENST00000374198 A0A1W2PS18 150 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 K7ERU9 68 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 M0R135 149 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 DEGS1O15121 323 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 PSG2P11465 335 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 PMCHP20382 165 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 RBM11P57052 281 aaKnown RBP10.94□□□□□ -0.66
PRPF4-201ENST00000374198 C1orf185Q5T7R7 199 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF799Q96GE5 643 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 IL36BQ9NZH7 164 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 SNURFLB1AK76 121 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 OR7C1O76099 320 aaPredicted RBP10.94□□□□□ -0.66
PRPF4-201ENST00000374198 REG1AP05451 166 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 COX5AP20674 150 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ATP5G3P48201 142 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 OR1D5P58170 312 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 LRRC10Q5BKY1 277 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ERASQ7Z444 233 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ZDHHC23Q8IYP9 409 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ATOH7Q8N100 152 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 OR51H1Q8NH63 302 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 TRBV20OR9-2A0A075B6H5 130 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 AQP7P3A6NL99 342 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF891A8MT65 544 aaPredicted RBP10.94□□□□□ -0.66
PRPF4-201ENST00000374198 EFNA2O43921 213 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 S100GP29377 79 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 OTX1P32242 354 aaPredicted RBP10.94□□□□□ -0.66
PRPF4-201ENST00000374198 TNFRSF4P43489 277 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 GABRA2P47869 451 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF83P51522 516 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 GFRA1P56159 465 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 PRR27Q6MZM9 219 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF596Q8TC21 504 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 LSM10Q969L4 123 aaKnown RBP10.94□□□□□ -0.66
PRPF4-201ENST00000374198 STRADBQ9C0K7 418 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 KCNIP2Q9NS61 270 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 IL19Q9UHD0 177 aa10.94□□□□□ -0.66
PRPF4-201ENST00000374198 IGKV3D-11A0A0A0MRZ8 115 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 NBEAP1P0C6P0 100 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 FRMD6-AS1P0C7T7 363 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 CD38P28907 300 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 THBS3P49746 956 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 MRPS21P82921 87 aaKnown RBP10.93□□□□□ -0.66
PRPF4-201ENST00000374198 DAZAP2Q15038 168 aaPredicted RBP10.93□□□□□ -0.66
PRPF4-201ENST00000374198 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 RAET1LQ5VY80 246 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 LHFPL4Q7Z7J7 247 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 NIT1Q86X76 327 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 OR2AE1Q8NHA4 323 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 ARHGAP21Q5T5U3 1957 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF324O75467 553 aaPredicted RBP10.93□□□□□ -0.66
PRPF4-201ENST00000374198 S1PR2O95136 353 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 IGKV1-39P01597 117 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 IGKV1D-39P04432 117 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 GLB1P16278 677 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 MSR1P21757 451 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 GUCA1AP43080 201 aaPredicted RBP10.93□□□□□ -0.66
PRPF4-201ENST00000374198 LGALS4P56470 323 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 ARG2P78540 354 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 SRSF7Q16629 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF4-201ENST00000374198 STUMQ69YW2 141 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 OR4A47Q6IF82 309 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms