RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 VAMP2P63027 116 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 FAM74A3Q4VXF1 159 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 ZNF66Q6ZN08 573 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 OR2C3Q8N628 320 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 TCTEX1D1Q8N7M0 179 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 MAGT1Q9H0U3 335 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 CISD1Q9NZ45 108 aaKnown RBP20.73■□□□□ 0.91
CTSA-203ENST00000372459 PIEZO1Q92508 2521 aa20.73■□□□□ 0.91
CTSA-203ENST00000372459 WRBO00258 174 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 IGKV1-5P01602 117 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 ADCYAP1P18509 176 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 RPL30P62888 115 aaKnown RBP20.72■□□□□ 0.91
CTSA-203ENST00000372459 CDSNQ15517 529 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 MST1LQ2TV78 715 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 SMIM8Q96KF7 97 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 HSD17B10Q99714 261 aaKnown RBP20.72■□□□□ 0.91
CTSA-203ENST00000372459 SMIM3Q9BZL3 60 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 TMEM106BQ9NUM4 274 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 PRELID1Q9Y255 219 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 PPIAL4EA0A075B759 164 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 ZNF705EA8MWA4 302 aaPredicted RBP20.72■□□□□ 0.91
CTSA-203ENST00000372459 PPIAL4DF5H284 164 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 CLDN1O95832 211 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 PLAUP00749 431 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 PPIAL4FP0DN26 164 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 LPAR6P43657 344 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 PJVKQ0ZLH3 352 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 C17orf58Q2M2W7 97 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 BTNL3Q6UXE8 466 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 TCTEX1D2Q8WW35 142 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 CCL17Q92583 94 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 FAM212BQ9NTI7 297 aaPredicted RBP20.72■□□□□ 0.91
CTSA-203ENST00000372459 PPIAL4AQ9Y536 164 aa20.72■□□□□ 0.91
CTSA-203ENST00000372459 KBTBD11-OT1A0A1B0GTJ5 212 aa20.71■□□□□ 0.91
CTSA-203ENST00000372459 TMPRSS2O15393 492 aa20.71■□□□□ 0.91
CTSA-203ENST00000372459 GPR12P47775 334 aa20.71■□□□□ 0.91
CTSA-203ENST00000372459 Q3ZCU0 254 aa20.71■□□□□ 0.91
CTSA-203ENST00000372459 CLN8Q9UBY8 286 aa20.71■□□□□ 0.91
CTSA-203ENST00000372459 CACNG5Q9UF02 275 aa20.71■□□□□ 0.91
CTSA-203ENST00000372459 ADGRG4Q8IZF6 3080 aa20.7■□□□□ 0.91
CTSA-203ENST00000372459 OMGP23515 440 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 CLEC9AQ6UXN8 241 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 PUSL1Q8N0Z8 303 aaKnown RBP20.7■□□□□ 0.9
CTSA-203ENST00000372459 FGFRL1Q8N441 504 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 LYRM2Q9NU23 88 aaPredicted RBP20.7■□□□□ 0.9
CTSA-203ENST00000372459 ATRXP46100 2492 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 CHD8Q9HCK8 2581 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 TMEM8BA6NDV4 472 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 CAV2P51636 162 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 ARHGDIBP52566 201 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 EWSR1Q01844 656 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTSA-203ENST00000372459 Q6ZRM9 215 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 SLC25A31Q9H0C2 315 aa20.7■□□□□ 0.9
CTSA-203ENST00000372459 FAM24AA6NFZ4 105 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 RAMP3O60896 148 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 NXPH3O95157 252 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 CLDN14O95500 239 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 IZUMO4Q1ZYL8 232 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 SPAG16Q8N0X2 631 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 UBAC2Q8NBM4 344 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 CORO2AQ92828 525 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 BSCL2Q96G97 398 aaPredicted RBP20.69■□□□□ 0.9
CTSA-203ENST00000372459 MMP24Q9Y5R2 645 aa20.69■□□□□ 0.9
CTSA-203ENST00000372459 BORCS7-ASMTA0A0B4J1R7 106 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 SIAH2O43255 324 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 CHST1O43916 411 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 NHLH2Q02577 135 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 OR2B11Q5JQS5 317 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 ZNF729A6NN14 1252 aaPredicted RBP20.68■□□□□ 0.9
CTSA-203ENST00000372459 F8W036 122 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 ITGB1BP1O14713 200 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 H2AFB1P0C5Y9 115 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 SULT1A2P50226 295 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 BLOC1S1P78537 153 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 AKR1C1Q04828 323 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 ZNF816Q0VGE8 651 aaPredicted RBP20.68■□□□□ 0.9
CTSA-203ENST00000372459 TCF23Q7RTU1 214 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 SEC11CQ9BY50 192 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 GFOD1Q9NXC2 390 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 SLC25A10Q9UBX3 287 aaPredicted RBP20.68■□□□□ 0.9
CTSA-203ENST00000372459 TANC2Q9HCD6 1990 aa20.68■□□□□ 0.9
CTSA-203ENST00000372459 ROS1P08922 2347 aa20.67■□□□□ 0.9
CTSA-203ENST00000372459 DSCAML1Q8TD84 2053 aa20.67■□□□□ 0.9
CTSA-203ENST00000372459 C17orf98A8MV24 154 aa20.67■□□□□ 0.9
CTSA-203ENST00000372459 KIAA1324LA8MWY0 1029 aaPredicted RBP20.67■□□□□ 0.9
CTSA-203ENST00000372459 NDUFB7P17568 137 aa20.67■□□□□ 0.9
CTSA-203ENST00000372459 RAB7AP51149 207 aa20.67■□□□□ 0.9
CTSA-203ENST00000372459 ZNF672Q499Z4 452 aaPredicted RBP20.67■□□□□ 0.9
CTSA-203ENST00000372459 MUC15Q8N387 334 aa20.67■□□□□ 0.9
CTSA-203ENST00000372459 hADV38S2A0JD32 116 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 IGSF23A1L1A6 192 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 LINC00473A8K010 186 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 TSPAN9O75954 239 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 GUCA2BQ16661 112 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 SWI5Q1ZZU3 235 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 TMEM30BQ3MIR4 351 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 TMEM252Q8N6L7 170 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 LINC00574Q9H8X3 128 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 UQCC1Q9NVA1 299 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 COA4Q9NYJ1 87 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms