RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ZNF107Q9UII5 783 aaPredicted RBP13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 ANOS1P23352 680 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 OR2V1Q8NHB1 315 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 A0A0B4J2E0 115 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 A0A1B0GX12 115 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 ZNF205O95201 554 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 C1orf185Q5T7R7 199 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 OR8B12Q8NGG6 310 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 MIXL1Q9H2W2 232 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 FRRS1LQ9P0K9 344 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 TBC1D29Q9UFV1 150 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 K7EQS6 105 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 ID4P47928 161 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 BADQ92934 168 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 TARM1B6A8C7 271 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 HIST1H4AP62805 103 aaKnown RBP13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 GTSF1LQ9H1H1 148 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 ARAP2Q8WZ64 1704 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 PIGYQ3MUY2 71 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 FOXB1Q99853 325 aa13.4□□□□□ -0.26
GTF3C4-201ENST00000372146 ISG15P05161 165 aa13.4□□□□□ -0.27
GTF3C4-201ENST00000372146 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.27
GTF3C4-201ENST00000372146 MGST2Q99735 147 aa13.4□□□□□ -0.27
GTF3C4-201ENST00000372146 HCFC2Q9Y5Z7 792 aa13.4□□□□□ -0.27
GTF3C4-201ENST00000372146 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 ASPDHA6ND91 283 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 GLULP15104 373 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 C5orf30Q96GV9 206 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 IL23AQ9NPF7 189 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 KLF13Q9Y2Y9 288 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 COL2A1P02458 1487 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 DCAF12L2Q5VW00 463 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 HIST1H2BAQ96A08 127 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 TM4SF19Q96DZ7 209 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 MFRPQ9BY79 579 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 CCL28Q9NRJ3 127 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 22.4
GTF3C4-201ENST00000372146 C4orf45Q96LM5 186 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF48Q96MX3 618 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF660Q6AZW8 331 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC25A40Q8TBP6 338 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF707Q96C28 371 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC6A13Q9NSD5 602 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 TNFAIP6P98066 277 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 RIPPLY2Q5TAB7 128 aa13.39□□□□□ -0.27
GTF3C4-201ENST00000372146 J3QR06 171 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 F2RL2O00254 374 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 PLSCR4Q9NRQ2 329 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RBMY1BA6NDE4 496 aaKnown RBP13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RBMY1EA6NEQ0 496 aaKnown RBP13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 MPTX1A8MV57 137 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RBMY1DP0C7P1 496 aaKnown RBP13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RBMY1A1P0DJD3 496 aaKnown RBP13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 RBMY1CP0DJD4 496 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 SSPNQ14714 243 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 MMP25Q9NPA2 562 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 DHHO43323 396 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 HYPMO75409 117 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 LAMTOR2Q9Y2Q5 125 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 SSTR5P35346 364 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 MRPS11P82912 194 aaKnown RBP13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 METTL26Q96S19 204 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 FUT5Q11128 374 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 TTC9CQ8N5M4 171 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 ZBP1Q9H171 429 aa13.38□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC25A20O43772 301 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 GPR183P32249 361 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 FAM78AQ5JUQ0 283 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 RNASEH2CQ8TDP1 164 aaKnown RBP13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC25A10Q9UBX3 287 aaPredicted RBP13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 KCNMB2Q9Y691 235 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 A0A0A6YYD5 115 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 SYNGR1O43759 233 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 SFTPCP11686 197 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 SRSF12Q8WXF0 261 aaKnown RBP13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 GMLQ99445 158 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 TRBV20OR9-2A0A075B6H5 130 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 MRPS21P82921 87 aaKnown RBP13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 RNF122Q9H9V4 155 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF257Q9Y2Q1 563 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 ESDP10768 282 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 CX3CL1P78423 397 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC26A1Q9H2B4 701 aa13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 NHP2Q9NX24 153 aaKnown RBP13.37□□□□□ -0.27
GTF3C4-201ENST00000372146 NPVFQ9HCQ7 196 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 IGHV3OR16-12A0A075B7B8 117 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF729A6NN14 1252 aaPredicted RBP13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 ZGLP1P0C6A0 271 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 RNPS1Q15287 305 aaKnown RBP13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms