RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 DRAM1Q8N682 238 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 UFSP2Q9NUQ7 469 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 COA4Q9NYJ1 87 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 FZR1Q9UM11 496 aa11.74□□□□□ -0.53
LDB3-204ENST00000372066 CARHSP1Q9Y2V2 147 aaKnown RBP11.74□□□□□ -0.53
LDB3-204ENST00000372066 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 C3orf80F5H4A9 247 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 HBZP02008 142 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 OR8U9P0C7N5 309 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 TAS2R30P59541 319 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 FAM27E3Q08E93 113 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
LDB3-204ENST00000372066 SVBPQ8N300 66 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 OR1L1Q8NH94 360 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 MEGF10Q96KG7 1140 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 SNX22Q96L94 193 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 WFDC1Q9HC57 220 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 PPP1R3CQ9UQK1 317 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 LAMP3Q9UQV4 416 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 RNF115Q9Y4L5 304 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 FLNAP21333 2647 aaKnown RBP11.73□□□□□ -0.53
LDB3-204ENST00000372066 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
LDB3-204ENST00000372066 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 UMAD1C9J7I0 102 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 MGST3O14880 152 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 SPINT2O43291 252 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 DFFBO76075 338 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 PRDX2P32119 198 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 AKR1C2P52895 323 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 NHLH2Q02577 135 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 AESQ08117 197 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 STX12Q86Y82 276 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 LFNGQ8NES3 379 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 NUP37Q8NFH4 326 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 EDARADDQ8WWZ3 215 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
LDB3-204ENST00000372066 WFIKKN1Q96NZ8 548 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 TSNAXQ99598 290 aaKnown RBP11.72□□□□□ -0.53
LDB3-204ENST00000372066 SEC11CQ9BY50 192 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
LDB3-204ENST00000372066 HRNRQ86YZ3 2850 aaPredicted RBP11.72□□□□□ -0.53
LDB3-204ENST00000372066 ABCD4O14678 606 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 ZNF737O75373 536 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 GZMHP20718 246 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 CR1LQ2VPA4 569 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 Q5PR19 223 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 ZNF66Q6ZN08 573 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 BSCL2Q96G97 398 aaPredicted RBP11.71□□□□□ -0.53
LDB3-204ENST00000372066 GPHA2Q96T91 129 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 TREM1Q9NP99 234 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 DUSP13Q9UII6 198 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
LDB3-204ENST00000372066 VPS13CQ709C8 3753 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 CHST1O43916 411 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 LY6G6DO95868 133 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 IGKV1-39P01597 117 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 IGKV1D-39P04432 117 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 TNFSF4P23510 183 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 CAMLGP49069 296 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 DVL1P1P54792 670 aaPredicted RBP11.71□□□□□ -0.54
LDB3-204ENST00000372066 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.54
LDB3-204ENST00000372066 MSMPQ1L6U9 139 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 ZNF585BQ52M93 769 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 SMUG1Q53HV7 270 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 CD177Q8N6Q3 437 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 MRGPRDQ8TDS7 321 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 OR2V2Q96R30 315 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 NKX6-2Q9C056 277 aaPredicted RBP11.71□□□□□ -0.54
LDB3-204ENST00000372066 OR2D2Q9H210 308 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 CACNG5Q9UF02 275 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 CACFD1Q9UGQ2 172 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 JPT1Q9UK76 154 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 ARID1AO14497 2285 aa11.71□□□□□ -0.54
LDB3-204ENST00000372066 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
LDB3-204ENST00000372066 F8W036 122 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 SYNGR2O43760 224 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 TSPAN15O95858 294 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 LHBP01229 141 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 IGKV1-5P01602 117 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 EPHA1P21709 976 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 SULT1A1P50225 295 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 DEFA5Q01523 94 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 DIRC2Q96SL1 478 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 HSD17B10Q99714 261 aaKnown RBP11.7□□□□□ -0.54
LDB3-204ENST00000372066 ATP5SQ99766 215 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 MAGT1Q9H0U3 335 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms