RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ZNF584Q8IVC4 421 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 MMD2Q8IY49 270 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LYG1Q8N1E2 194 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SMIM4Q8WVI0 70 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 DNAJC30Q96LL9 226 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 NMNAT3Q96T66 252 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 FGF23Q9GZV9 251 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 PPA2Q9H2U2 334 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 C11orf1Q9H5F2 150 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ZNF665Q9H7R5 613 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 MSL2Q9HCI7 577 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SPANXB1Q9NS25 103 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 NINQ8N4C6 2090 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ZNF292O60281 2723 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 FGF2P09038 288 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LMO1P25800 156 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 RPL13AP40429 203 aaKnown RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 RFC3P40938 356 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TLE4Q04727 773 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 IL15RAQ13261 267 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LINC00303Q3SY05 128 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 RTL6Q6ICC9 239 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LINC00596Q86U02 117 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TCTE3Q8IZS6 198 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 EIF4E3Q8N5X7 224 aaKnown RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 C15orf54Q8N8G6 183 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 CHST4Q8NCG5 386 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 OR51T1Q8NGJ9 327 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ERMAPQ96PL5 475 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 RNF167Q9H6Y7 350 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TMEM138Q9NPI0 162 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 POU2F3Q9UKI9 436 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 KLF13Q9Y2Y9 288 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 TNFSF13O75888 250 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 KRT33AO76009 404 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 UBL3O95164 117 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 HBE1P02100 147 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 DUX4L4P0CJ87 422 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 PSG1P11464 419 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 CD79AP11912 226 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 ATF1P18846 271 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 HCCSP53701 268 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 OR12D2P58182 307 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 LY6DQ14210 128 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 ZNF169Q14929 603 aaPredicted RBP3.17□□□□□ -1.9
MCF2-203ENST00000370576 PVRIGQ6DKI7 326 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 DHRS11Q6UWP2 260 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 FBXW12Q6X9E4 464 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 OR52E2Q8NGJ4 325 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 C15orf40Q8WUR7 153 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 HS3ST6Q96QI5 342 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 MEGF9Q9H1U4 602 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 MS4A6AQ9H2W1 248 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 HMG20AQ9NP66 347 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 MLXQ9UH92 298 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 IGKV1-9A0A0C4DH69 117 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 TNFSF15O95150 251 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 APOHP02749 345 aaPredicted RBP3.17□□□□□ -1.9
MCF2-203ENST00000370576 IL5P05113 134 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 IRF2P14316 349 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 RAB25P57735 213 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 OR8G1Q15617 311 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 C1orf194Q5T5A4 169 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 PCSK4Q6UW60 755 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 UEVLDQ8IX04 471 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 RBMXL3Q8N7X1 1067 aaKnown RBP3.17□□□□□ -1.9
MCF2-203ENST00000370576 OR1J4Q8NGS1 313 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 OVOL2Q9BRP0 275 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 OR8D2Q9GZM6 311 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 VSIRQ9H7M9 311 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 ZNF319Q9P2F9 582 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 OR5V1Q9UGF6 321 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 EIF4E1BA6NMX2 242 aaKnown RBP3.17□□□□□ -1.9
MCF2-203ENST00000370576 RENP00797 406 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 IGHV2-5P01817 119 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 CRYAAP02489 173 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 CD55P08174 381 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 MGMTP16455 207 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 KLK2P20151 261 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 AGTR1P30556 359 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 HRH1P35367 487 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 C1DQ13901 141 aaKnown RBP3.17□□□□□ -1.9
MCF2-203ENST00000370576 SLC10A1Q14973 349 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 ZNF260Q3ZCT1 412 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 C1orf189Q5VU69 101 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 Q6ZPA2 131 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 Q8WTZ3 238 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 GMPPAQ96IJ6 420 aaPredicted RBP3.17□□□□□ -1.9
MCF2-203ENST00000370576 FOXC2Q99958 501 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 TCEAL7Q9BRU2 100 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 TMEM204Q9BSN7 226 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 MED11Q9P086 117 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 FZR1Q9UM11 496 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 SSR3Q9UNL2 185 aa3.17□□□□□ -1.9
MCF2-203ENST00000370576 A0A0B4J2A0 478 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 NAP1L6A6NFF2 107 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 OR5H1A6NKK0 313 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 GABARAPH6UMI1 98 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 PDCD5O14737 125 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms