RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NAT1P18440 290 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 NFYAP23511 347 aaPredicted RBP11.04□□□□□ -0.64
SSR4-202ENST00000370085 CD24P25063 80 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 FCGR2CP31995 323 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 HERV-K104P61576 105 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 SSBP1Q04837 148 aaKnown RBP11.04□□□□□ -0.64
SSR4-202ENST00000370085 LSAMPQ13449 338 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 SNAPC3Q92966 411 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 ADTRPQ96IZ2 230 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 MRPL20Q9BYC9 149 aaKnown RBP11.04□□□□□ -0.64
SSR4-202ENST00000370085 PRSS22Q9GZN4 317 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 PARP12Q9H0J9 701 aaKnown RBP11.04□□□□□ -0.64
SSR4-202ENST00000370085 ANAPC10Q9UM13 185 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 MOB4Q9Y3A3 225 aa11.04□□□□□ -0.64
SSR4-202ENST00000370085 IGHV3-72A0A0B4J1Y9 119 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 ZNF736B4DX44 427 aaPredicted RBP11.03□□□□□ -0.64
SSR4-202ENST00000370085 H7C2Y5 167 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 M0R1X1 148 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 CTDSPLO15194 276 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 IFNA6P05013 189 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 TBPP20226 339 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 HLA-DMAP28067 261 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 TNFSF8P32971 234 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 TSPAN5P62079 268 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 EBI3Q14213 229 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 RPL39P5Q59GN2 51 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 C11orf88Q6PI97 169 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 FAM131AQ6UXB0 335 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 C12orf54Q6X4T0 127 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 TMEM17Q86X19 198 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 ZNF645Q8N7E2 425 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 ABHD1Q96SE0 405 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 NABP2Q9BQ15 211 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 BATF3Q9NR55 127 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 TAS2R8Q9NYW2 309 aa11.03□□□□□ -0.64
SSR4-202ENST00000370085 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.65
SSR4-202ENST00000370085 FGF16O43320 207 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 CHST1O43916 411 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 PEX14O75381 377 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 TUSC2O75896 110 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 TSPAN9O75954 239 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 PPYP01298 95 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 PTBP1P26599 531 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSR4-202ENST00000370085 HRH1P35367 487 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 THBS3P49746 956 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 COMPP49747 757 aaPredicted RBP11.02□□□□□ -0.65
SSR4-202ENST00000370085 DYRK1AQ13627 763 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 HNF4GQ14541 408 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 RTL8BQ17RB0 113 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 RNASE12Q5GAN4 147 aaKnown RBP11.02□□□□□ -0.65
SSR4-202ENST00000370085 CCBE1Q6UXH8 406 aaPredicted RBP11.02□□□□□ -0.65
SSR4-202ENST00000370085 OVCH2Q7RTZ1 564 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 OR6F1Q8NGZ6 308 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 OR52I2Q8NH67 350 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 EAF1Q96JC9 268 aaPredicted RBP11.02□□□□□ -0.65
SSR4-202ENST00000370085 MDFIQ99750 246 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 ZNF251Q9BRH9 671 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 MTFP1Q9UDX5 166 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 ZNF107Q9UII5 783 aaPredicted RBP11.02□□□□□ -0.65
SSR4-202ENST00000370085 WASHC3Q9Y3C0 194 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 MMP24Q9Y5R2 645 aa11.02□□□□□ -0.65
SSR4-202ENST00000370085 CLPSL1A2RUU4 121 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 J3QRK9 145 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 PMP2P02689 132 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 CSF1P09603 554 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 RRASP10301 218 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 S100GP29377 79 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 RFX2P48378 723 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 TAS2R19P59542 299 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 MSMO1Q15800 293 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 RNASE10Q5GAN6 216 aaKnown RBP11.01□□□□□ -0.65
SSR4-202ENST00000370085 Q6ZSV7 163 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 ZBTB34Q8NCN2 500 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 SPATA3Q8NHX4 192 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 RNF5Q99942 180 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 SDHAF2Q9NX18 166 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 KLK11Q9UBX7 282 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 PRELID3BQ9Y3B1 194 aa11.01□□□□□ -0.65
SSR4-202ENST00000370085 H0YJW9 148 aa11□□□□□ -0.65
SSR4-202ENST00000370085 CT45A6P0DMU7 189 aa11□□□□□ -0.65
SSR4-202ENST00000370085 CT45A5P0DMU8 189 aa11□□□□□ -0.65
SSR4-202ENST00000370085 CT45A7P0DMV0 189 aa11□□□□□ -0.65
SSR4-202ENST00000370085 AADACP22760 399 aa11□□□□□ -0.65
SSR4-202ENST00000370085 FXYD4P59646 89 aa11□□□□□ -0.65
SSR4-202ENST00000370085 MMDQ15546 238 aa11□□□□□ -0.65
SSR4-202ENST00000370085 PYDC2Q56P42 97 aa11□□□□□ -0.65
SSR4-202ENST00000370085 AWAT1Q58HT5 328 aa11□□□□□ -0.65
SSR4-202ENST00000370085 VAX1Q5SQQ9 334 aa11□□□□□ -0.65
SSR4-202ENST00000370085 LPCAT3Q6P1A2 487 aa11□□□□□ -0.65
SSR4-202ENST00000370085 DHRS11Q6UWP2 260 aa11□□□□□ -0.65
SSR4-202ENST00000370085 PDPNQ86YL7 162 aa11□□□□□ -0.65
SSR4-202ENST00000370085 C3orf56Q8N813 242 aa11□□□□□ -0.65
SSR4-202ENST00000370085 TMEM229BQ8NBD8 167 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms