RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MAP1LC3BQ9GZQ8 125 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF407Q9C0G0 2248 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 TRAV14DV4A0A0A6YYC5 116 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A0U1RQK1 487 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A1W2PN81 502 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 H7BYZ3 331 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 K7N7A8 449 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 RHBDL1O75783 438 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 IL18BPO95998 194 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 UCP1P25874 307 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 G6PCP35575 357 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CHRNA7P36544 502 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF714Q96N38 554 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 SMIM7Q9BQ49 75 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CABLES2Q9BTV7 478 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 LYRM2Q9NU23 88 aaPredicted RBP4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CALYQ9NYX4 217 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 RCC2Q9P258 522 aaKnown RBP4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF24Q9Y225 148 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CACNA1DQ01668 2161 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF729A6NN14 1252 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 YIF1AO95070 293 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CELA3BP08861 270 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 KIR2DL2P43627 348 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 FOXG1P55316 489 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 SSTP61278 116 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ERVS71-1P61550 626 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 LHFPL1Q86WI0 220 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 TGIF2LYQ8IUE0 185 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 TGIF2LXQ8IUE1 241 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 H1FOOQ8IZA3 346 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 TPRX1Q8N7U7 411 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 BORCS7Q96B45 105 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 DAZAP1Q96EP5 407 aaKnown RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CCL13Q99616 98 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 PARD6AQ9NPB6 346 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 SERTAD4Q9NUC0 356 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ONECUT1Q9UBC0 465 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF115Q9Y4L5 304 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 WNT5AP41221 380 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 RAB4BP61018 213 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 GNB1P62873 340 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ASCL4Q6XD76 172 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 COLCA1Q6ZS62 124 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 Q6ZS92 163 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF429Q86V71 674 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 FGFRL1Q8N441 504 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF383Q8NA42 475 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 MRPL30Q8TCC3 161 aaKnown RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 FLYWCH2Q96CP2 140 aaKnown RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 GSN-AS1Q9NRJ2 163 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 TRBV6-7A0A0A0MS04 114 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV1-12A0A0C4DH73 117 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 MBD3L4A6NDZ8 208 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 MBD3L3A6NE82 208 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 RBFOX3A6NFN3 312 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 SEC14L6B5MCN3 397 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 B9A039 149 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV1D-12P01611 117 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 GYPAP02724 150 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 PAX6P26367 422 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 ATP6V0CP27449 155 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CDC34P49427 236 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CEBPDP49716 269 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 SPCS3P61009 180 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 RHOBP62745 196 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 NHLH2Q02577 135 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 FAM27E3Q08E93 113 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 DRAM1Q8N682 238 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 FAM169BQ8N8A8 192 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 OR10G4Q8NGN3 311 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 OR10G9Q8NGN4 311 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 MBD3L2Q8NHZ7 208 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 GPR146Q96CH1 333 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 TP53RKQ96S44 253 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 LRFN3Q9BTN0 628 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CISD1Q9NZ45 108 aaKnown RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 OR1A1Q9P1Q5 309 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CLN8Q9UBY8 286 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 TUBD1Q9UJT1 453 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 CARHSP1Q9Y2V2 147 aaKnown RBP4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 APC2O95996 2303 aa4.51□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A087X0M5 115 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A1B0GX30 115 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 PPP5D1E7EU14 171 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 K7EQM0 130 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 OR7C2O60412 319 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IGHV3-13P01766 116 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IGHV3-7P01780 117 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 MC5RP33032 325 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 GLIPR1P48060 266 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 CXorf66Q5JRM2 361 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF705AQ6ZN79 300 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 SPACA3Q8IXA5 215 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 CMTM2Q8TAZ6 248 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 PRR7Q8TB68 274 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 FAM216AQ8WUB2 273 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms